Gene PP_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2604 
Symbol 
ID1045992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2977026 
End bp2978468 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content62% 
IMG OID637146026 
Productmajor facilitator family transporter 
Protein accessionNP_744748 
Protein GI26989323 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0399959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCTGC CGTCTTCACT GCTCACCATG CACCGGCCTT GCGTGCCCCC CTGCCTGGGA 
AACGGTCACG CACCCGTAGC ACCGCAGCTG AATACAATTT CAAGAAACGA GCAGTCTATG
AACCACTCCA AGATCCCCCC CGCCGCGCCC CGGATGTCCC AGGGCTCGAT CGGCGACAAG
CTCCGCGGCG CCTTCGGCGT CGGCAAGACC CGTTGGGGCA TGCTCGCCCT GGTGTTCTTC
GCCACCACCC TGAACTACAT CGACCGCGCC GCCCTTGGCA TCATGCAGCC CGTGCTGGCC
AAGGAAATGA GCTGGACGGC GATGGACTAC GCCAACATCA ATTTCTGGTT CCAGGTCGGC
TATGCCATCG GCTTTTTGCT GCAAGGCCGG CTGATCGACA AGGTCGGAGT CAAACGGGCC
TTCTTCTTCG CTGTACTGCT GTGGAGCCTG GCCACGGGTG CCCACGGCCT GGCCACCTCG
GCTGCAGGTT TCATGGTCTG CCGCTTCATC CTCGGCCTGA CCGAGGCCGC CAACTACCCG
GCCTGCGTCA AGACCGTGCG CCTGTGGTTC CCGGCGGGTG AGCGGGCGAT TGCAACGGGG
TTGTTCAACG CCGGTACCAA TGTTGGCGCC ATGGTCACCC CCGCGCTGTT GCCGCTGATC
CTGGCTGTAT GGGGCTGGCA GGCTGCGTTC ATCGCCATGG GCAGCCTGGG CCTGGTGTGG
GTCGTGTTTT GGGTGCTGAA ATACTACAAC CCGGAAGACC ACCCCCGCGT GCGTCAGAGC
GAGGTGCAGT ACATCCAGCA GGATGACGAG CCCGAGCCGA CCCGCGTGCC GTTCAGCCGC
ATCCTGCGCC TGCGTGGCAC CTGGGCTTTT GCAGTGGCCT ATGCGATTAC CGCGCCGGTG
TTCTGGTTCT ACCTGTACTG GCTGCCGCCG TTCCTGAACC AGCAATACAG CCTGGGCATC
AACGTGACCC AGATGGGCAT CCCGTTGATC ATCATCTGGC TGACGGCAGA CTTCGGCAGT
ATCGGGGGAG GCATTCTGTC CTCGTGGCTG ATCGGCCGTG GCGTGCGTGC CACAACAGCG
CGCTTGGTGT CCATGCTGAT CTTTGCCTGC ACCATGCTCA GCGTCATCTT TGCTGCCAAC
GCCAGTGGAC TGTGGGTCGC GGTGGCGGCC ATCTCGATCG CGGTAGGCGC GCACCAGGCG
TGGACGGCGA ATATCTGGAG CCTGGTGATG GACTACACAC CCAAGCATCT GGTGAGCACC
GTATTCGGCT TCGGCAGCAT GTGTGCGGCA ATTGGCGGGA TGTTCATGAC GCAGATTGTC
GGCAGCGTGC TGACCGCTAC CAACAACAAC TATGCCGTGC TGTTTACCAT GATCCCGGCC
ATGTACTTCC TGGCGTTGGT GTGGATGTAT TTCATGGCAC CGCGCAAGGT CGAGAGCGCC
TGA
 
Protein sequence
MTLPSSLLTM HRPCVPPCLG NGHAPVAPQL NTISRNEQSM NHSKIPPAAP RMSQGSIGDK 
LRGAFGVGKT RWGMLALVFF ATTLNYIDRA ALGIMQPVLA KEMSWTAMDY ANINFWFQVG
YAIGFLLQGR LIDKVGVKRA FFFAVLLWSL ATGAHGLATS AAGFMVCRFI LGLTEAANYP
ACVKTVRLWF PAGERAIATG LFNAGTNVGA MVTPALLPLI LAVWGWQAAF IAMGSLGLVW
VVFWVLKYYN PEDHPRVRQS EVQYIQQDDE PEPTRVPFSR ILRLRGTWAF AVAYAITAPV
FWFYLYWLPP FLNQQYSLGI NVTQMGIPLI IIWLTADFGS IGGGILSSWL IGRGVRATTA
RLVSMLIFAC TMLSVIFAAN ASGLWVAVAA ISIAVGAHQA WTANIWSLVM DYTPKHLVST
VFGFGSMCAA IGGMFMTQIV GSVLTATNNN YAVLFTMIPA MYFLALVWMY FMAPRKVESA