| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2586 |
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| Symbol | |
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| ID | 1045973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2953112 |
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| End bp | 2954524 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146008 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | NP_744730 |
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| Protein GI | 26989305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.163018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.86735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTGCA TCCCTTTTCA GGAGTTAGCA ATGCATACAA CAACAAGTAC AGCCCATAGC
CCCGCCCCGC ATGCACCCTC GCAACCCGGC ACCAGCACCG GCCGCTTCCG CAAGTCCATG
AGCATGACCG CCCTGGTGCT GTTTGGCCTG GCCTACATGG TGCCCCTGGC CGTATTCACC
ACCTACGGGC TGGTCACCCA GATGACCAAA GGGCACCTGC CCACCGCCTA CCTGCTCACG
CTCGCCGCCA TGCTGCTGAC CGCCTACAGT TACGGCCGCA TGGTCCAGGC CCACCCCTAC
TCCGGCTCGG TCTACACCTA CACGCGCAAG GCCTTCGGCA GCCATATCGG CTTCATCACC
GGTTGGACAC TGCTGCTCGA CTACATCTTT CTGCCGCTGC TCAGCTATCT GCTGATCGGC
ATCTACATGT CGGAATACTT CCCGACCATC CATGCCTGGG TGTGGGTAGC GGGTTCCATT
GCCCTGGTCA CCTTCCTCAA CCTGATCGGC ATCGAGTCGA TCACCCGGGT CAACTGGATC
CTGGTGGTGG TGCAACTGGT GTTCATCATC GTCTTCGTCG CTTTGTCCAT TCTCAAGCTC
AGCGGACAGG CGGAACCGGT GTCGCTGCTG GCCCCCTTGC ACCACGATGG CTTCAGCGTG
CCGTTGATCA TGACCGGCGC CGCCGTGCTG TGCCTGTCGT TCCTCGGCTT CGATGCGGTG
TCGACCATGG CTGAGGAAAC CAGTAACCCG ACCTACCGCA TTCCCGTGGC GATTCTGGCG
GTGTCGTTGA TCGGCGGCCT GCTATTTCTG GTGGTGTCTT ATTGCGCACA GATGGTGTTC
CCCGATTGGG GCAGCTTCGC CGATCCGGAT TCGGCGTCGG TTGACGTGAT GCGCCGGGTG
GGCGGCGAGC TGCTGGTAAC CGCCTTCACC GCTACCTACG TGGCGGGCTG CTTCGCCTCG
GCCATGGTGT CCCAGGCCAG CGTGTCGCGC GTACTGTTCG CCATGGGCCG CGACGGCGCA
TTGCCACGGG CATTCGGCCA GTTGGTGACG AAAAAGCGCG TGCCAGCCAC TGCCATCCTG
GTGGTCAGCC TACTGTCGCT GATCGCCCTG GTGATCACCC TGGATACCGT GGCGAACATG
ATCAGCTTTG GCGCACTGTT CGCCTTCTCG GCGGTGAACC TTGCAGTGGT CAAGCACTAC
CTGGTTGACC AGAAACTGCG CGGTTGCCGC AACTGCCTGC TGTACGGCGC CATTCCCGGC
CTGGGCTTTC TCAGCACGCT GTGGCTGTGG AGCAGCCTGA CCAGCCTGTC GTTCACCATC
GGCCTGTGCT GGATGGGCCT GGGCCTGTTG GTGCTACTGG GGCTGACCCG GGCGTTGCGC
GTGAAGCTGC CAGAGTTGCA GATGGCCGAG TGA
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| Protein sequence | MSCIPFQELA MHTTTSTAHS PAPHAPSQPG TSTGRFRKSM SMTALVLFGL AYMVPLAVFT
TYGLVTQMTK GHLPTAYLLT LAAMLLTAYS YGRMVQAHPY SGSVYTYTRK AFGSHIGFIT
GWTLLLDYIF LPLLSYLLIG IYMSEYFPTI HAWVWVAGSI ALVTFLNLIG IESITRVNWI
LVVVQLVFII VFVALSILKL SGQAEPVSLL APLHHDGFSV PLIMTGAAVL CLSFLGFDAV
STMAEETSNP TYRIPVAILA VSLIGGLLFL VVSYCAQMVF PDWGSFADPD SASVDVMRRV
GGELLVTAFT ATYVAGCFAS AMVSQASVSR VLFAMGRDGA LPRAFGQLVT KKRVPATAIL
VVSLLSLIAL VITLDTVANM ISFGALFAFS AVNLAVVKHY LVDQKLRGCR NCLLYGAIPG
LGFLSTLWLW SSLTSLSFTI GLCWMGLGLL VLLGLTRALR VKLPELQMAE
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