Gene PP_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2578 
Symbol 
ID1045951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2945221 
End bp2945751 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID637146000 
Producthypothetical protein 
Protein accessionNP_744722 
Protein GI26989297 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.130696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC TGCGCAATGC ATGTGTGGCC AGCCTGCTGG TGTGGCTCGG GGGCTGCAGC 
AGTACGCCGA ACAACTACCA CACGTTGGTA CCGAGCGACC CGGTGCGTGA CAGCGGCCAA
CGCATCCAGG TGGTCAGGGT GGCTGTGCCG CCCCAGGTCG ACCGCCCACA GTTGGTGGTG
CGGCAAGGGC AGAGCGGCCT GGCCATTCTG GAGACGGAGT GGTGGGGCGC CAACCTGGTG
GATGAATTCC GCAGCGCCCT GCAGGACCTG TTGGGCGGCC CGGCGGGCGG TGGCAAGGCG
TCGCTGCGGG TGGATGTGCA ACGCTTCGAC ACGGTACCAG GGCGCTACGC CTCGCTGGAG
GCCGTGTGGC GCCTGAAGCA GCAAGGGCAG GTCGAGCTGA CCTGCCGTAC GTCAGTGCAG
ACTGCTGCGG ACAACAGCAT CACCAGCCTG GTGAATGCGC ACCAGGCCAA CCTGCGCAAG
TTGGCCGAGG CGGTGCGGGG GAGTGCCCGG CAGGGTAGCT GCCCTGCATG A
 
Protein sequence
MQRLRNACVA SLLVWLGGCS STPNNYHTLV PSDPVRDSGQ RIQVVRVAVP PQVDRPQLVV 
RQGQSGLAIL ETEWWGANLV DEFRSALQDL LGGPAGGGKA SLRVDVQRFD TVPGRYASLE
AVWRLKQQGQ VELTCRTSVQ TAADNSITSL VNAHQANLRK LAEAVRGSAR QGSCPA