Gene PP_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2562 
Symbol 
ID1045928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2921966 
End bp2922451 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID637145985 
Producthypothetical protein 
Protein accessionNP_744707 
Protein GI26989282 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.559467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.419528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGG TTTTGCTCAT CGTCGATGTT CAGTCCACCT TCAGCCCGCC CGAGTGGCTG 
GTCGATGGTT TGCGGCGGTT GTCAGCGAAC ATTCCCACCA TAGCCTCGGT CGAGTTGCAC
GATGAACAGG TCACGCCGTT CGAGCGCCAG CTCGGCTGGC ACCCGGCGGC CGAGGACGAG
AGCCTGGTCG AGGCCGACCA GGTGTTCGTC AAGCATGGCT ATGGGCAAAG TGCCGAAGCT
ATCGAGTACA TCCGGCAACT GGGTGTAGAG CGGGTGCTGG TGTGTGGGCT GCAGACCGAA
ACCTGCGTGC TGGCCGCCGG CTTTGCCCTG TTCGATGCAG GGCTGATGCC CACGCTGGTG
ACAGACATGA CAATAGGATC GTCGCTGGAC CGCTCGGGCA AGCTGGGTAC CGACCTGTGG
AAGCACCACT TCCGCCAGGT CACCACCTCG GCCCAGGTGC TGGCTGAACT GGCCGGACGC
GAGTAG
 
Protein sequence
MRQVLLIVDV QSTFSPPEWL VDGLRRLSAN IPTIASVELH DEQVTPFERQ LGWHPAAEDE 
SLVEADQVFV KHGYGQSAEA IEYIRQLGVE RVLVCGLQTE TCVLAAGFAL FDAGLMPTLV
TDMTIGSSLD RSGKLGTDLW KHHFRQVTTS AQVLAELAGR E