Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2562 |
Symbol | |
ID | 1045928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2921966 |
End bp | 2922451 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145985 |
Product | hypothetical protein |
Protein accession | NP_744707 |
Protein GI | 26989282 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.559467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.419528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAGG TTTTGCTCAT CGTCGATGTT CAGTCCACCT TCAGCCCGCC CGAGTGGCTG GTCGATGGTT TGCGGCGGTT GTCAGCGAAC ATTCCCACCA TAGCCTCGGT CGAGTTGCAC GATGAACAGG TCACGCCGTT CGAGCGCCAG CTCGGCTGGC ACCCGGCGGC CGAGGACGAG AGCCTGGTCG AGGCCGACCA GGTGTTCGTC AAGCATGGCT ATGGGCAAAG TGCCGAAGCT ATCGAGTACA TCCGGCAACT GGGTGTAGAG CGGGTGCTGG TGTGTGGGCT GCAGACCGAA ACCTGCGTGC TGGCCGCCGG CTTTGCCCTG TTCGATGCAG GGCTGATGCC CACGCTGGTG ACAGACATGA CAATAGGATC GTCGCTGGAC CGCTCGGGCA AGCTGGGTAC CGACCTGTGG AAGCACCACT TCCGCCAGGT CACCACCTCG GCCCAGGTGC TGGCTGAACT GGCCGGACGC GAGTAG
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Protein sequence | MRQVLLIVDV QSTFSPPEWL VDGLRRLSAN IPTIASVELH DEQVTPFERQ LGWHPAAEDE SLVEADQVFV KHGYGQSAEA IEYIRQLGVE RVLVCGLQTE TCVLAAGFAL FDAGLMPTLV TDMTIGSSLD RSGKLGTDLW KHHFRQVTTS AQVLAELAGR E
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