Gene PP_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2555 
Symbol 
ID1045906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2902892 
End bp2903572 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID637145978 
Productmethyltransferase type 12 
Protein accessionNP_744700 
Protein GI26989275 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0699179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00777364 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAGCCGA TCATGCGCAA CCCTGAAGAC GCCTTGCTCG ACAGTTGGCA CCAGAACGCC 
CAGGCCTGGA TCGACGCCGT ACGCCATGGC GCCATCGAAA GCCGTCGCCA GGTCACTGAC
CAGGCCATCC TGCTGGCCAT CCTTGGCCGC CAGCCCGAAC GGGTGCTCGA CCTGGGCTGC
GGTGAGGGCT GGCTGCTGCG CGCGCTGGCC GACCGGGGTA TCGAGGCCGT GGGCGTCGAC
GGCGACAGAA CGCTGGTGGA TGCAGCGCGA GCTGCGGGCG CGGGTGAGGT GCACCTGGCC
AGCTATGCGC AGTTGGCTGA GGCGAAGGTG CCTGTTGGCA AGGACTATGA CCTGATCTGC
GCCAACTTCG CGCTGTTGCA CCAGGACATC ATTGAACTGT TGTCGGCCAT GCGTACTTTG
CTGGTGCCAG GCGGTGCGCT GGTGATCCAG ACCCTGCACC CGTGGAGCGT GGCCGACGGG
GATTATCAGG ATGGCTGGCG AGAGGAGTCT TTTGCCGGGT TTGCCGGGGA TTGGCAACCG
ATGCCTTGGT ATTTCCGCAC CCTGGCCAGC TGGCTGAATG CGCTGGACAT GGCGGGGTTG
AGGCTGGTCA GTCTGCAGGA ACCGCAGCAT CCGCAGAGCG CGGTGCCGCA GTCGTTGTTG
ATGGTGGCTG AGCGTCACTG A
 
Protein sequence
MEPIMRNPED ALLDSWHQNA QAWIDAVRHG AIESRRQVTD QAILLAILGR QPERVLDLGC 
GEGWLLRALA DRGIEAVGVD GDRTLVDAAR AAGAGEVHLA SYAQLAEAKV PVGKDYDLIC
ANFALLHQDI IELLSAMRTL LVPGGALVIQ TLHPWSVADG DYQDGWREES FAGFAGDWQP
MPWYFRTLAS WLNALDMAGL RLVSLQEPQH PQSAVPQSLL MVAERH