Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2555 |
Symbol | |
ID | 1045906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2902892 |
End bp | 2903572 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145978 |
Product | methyltransferase type 12 |
Protein accession | NP_744700 |
Protein GI | 26989275 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0699179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00777364 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAGCCGA TCATGCGCAA CCCTGAAGAC GCCTTGCTCG ACAGTTGGCA CCAGAACGCC CAGGCCTGGA TCGACGCCGT ACGCCATGGC GCCATCGAAA GCCGTCGCCA GGTCACTGAC CAGGCCATCC TGCTGGCCAT CCTTGGCCGC CAGCCCGAAC GGGTGCTCGA CCTGGGCTGC GGTGAGGGCT GGCTGCTGCG CGCGCTGGCC GACCGGGGTA TCGAGGCCGT GGGCGTCGAC GGCGACAGAA CGCTGGTGGA TGCAGCGCGA GCTGCGGGCG CGGGTGAGGT GCACCTGGCC AGCTATGCGC AGTTGGCTGA GGCGAAGGTG CCTGTTGGCA AGGACTATGA CCTGATCTGC GCCAACTTCG CGCTGTTGCA CCAGGACATC ATTGAACTGT TGTCGGCCAT GCGTACTTTG CTGGTGCCAG GCGGTGCGCT GGTGATCCAG ACCCTGCACC CGTGGAGCGT GGCCGACGGG GATTATCAGG ATGGCTGGCG AGAGGAGTCT TTTGCCGGGT TTGCCGGGGA TTGGCAACCG ATGCCTTGGT ATTTCCGCAC CCTGGCCAGC TGGCTGAATG CGCTGGACAT GGCGGGGTTG AGGCTGGTCA GTCTGCAGGA ACCGCAGCAT CCGCAGAGCG CGGTGCCGCA GTCGTTGTTG ATGGTGGCTG AGCGTCACTG A
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Protein sequence | MEPIMRNPED ALLDSWHQNA QAWIDAVRHG AIESRRQVTD QAILLAILGR QPERVLDLGC GEGWLLRALA DRGIEAVGVD GDRTLVDAAR AAGAGEVHLA SYAQLAEAKV PVGKDYDLIC ANFALLHQDI IELLSAMRTL LVPGGALVIQ TLHPWSVADG DYQDGWREES FAGFAGDWQP MPWYFRTLAS WLNALDMAGL RLVSLQEPQH PQSAVPQSLL MVAERH
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