| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2547 |
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| Symbol | |
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| ID | 1045832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2891895 |
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| End bp | 2892764 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637145970 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_744692 |
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| Protein GI | 26989267 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.291089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00703073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGGTTT CCCACGCTCA ACTCAAGGCT TTCCACGCGG TGGCCGTGCA CGGCAGCTTT
ACCCGCGCCG CTGAAAGGCT GTTTCTTACC CAGCCTGCGG TGTCCGACCA GGTACGCAAA
CTGGAGGAGC GCTTCGGCGT ATTGCTGTTC CACCGCAACA AACGCTCGGT GCAGCTCACC
GACCTTGGCG AGCGGCTGCT GGGCATCAGC CAGCGCCTGT TCGCCTGCGA GGCCGAAGCC
CAGGAACTGC TGCACGACTC GCGTGCGCTG CAGACCGGCA GCCTGGTGCT GGCAGTGGAT
GCGCCGGTGC ACGTGCTGCC GCAGATCGCC CGCTTCTGCC AGCGCTATCC AGGCATCCAG
GTGAAGATCG AAACCGGCAA TACCGACGAA TCGCTGGCGC GGCTGTTCAG CTATCAGGCC
GACCTGGCCC TGCTGGGGCG CGATGTCGAC GATGAGCGCC TGCATTGCCT GCCGCTGCGT
CGTGACCCGA TGGTGGCGTT CGTTTCCCAC AACCACCCAT GGGCCAGCCG TGGCTCGATC
AGCCTGGCCG ACCTGGACGA CACGCCACTG GTGCTGCGCG AGCCCGGCTC GGTGACGCGG
CAGACGCTGG AGGAAGAGAT GCAACGTGCC GGCCTGCGGA TACGCGCAGC GATCCAGGTG
GAAGGCCGGG AAGCGGCGCG TGAAGCGGTG GTGGTAGGCA TTGGCGTGGG CGTGGTGTCG
GCGGCGGAGT TCGGTGCCGA TGCGCGGGTG TGTGCATTGC CGATCGTCGA TTGCCAGCGG
CATTTGACCG AGACCCTGGT GTGCCTGAGC GAGCAGCGTA CGCGCCGGGT GGTGGCGACT
TTCCTGCAGA TGGTCGAGGA AGGGGTGTAG
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| Protein sequence | MSVSHAQLKA FHAVAVHGSF TRAAERLFLT QPAVSDQVRK LEERFGVLLF HRNKRSVQLT
DLGERLLGIS QRLFACEAEA QELLHDSRAL QTGSLVLAVD APVHVLPQIA RFCQRYPGIQ
VKIETGNTDE SLARLFSYQA DLALLGRDVD DERLHCLPLR RDPMVAFVSH NHPWASRGSI
SLADLDDTPL VLREPGSVTR QTLEEEMQRA GLRIRAAIQV EGREAAREAV VVGIGVGVVS
AAEFGADARV CALPIVDCQR HLTETLVCLS EQRTRRVVAT FLQMVEEGV
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