| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2458 |
|---|
| Symbol | rbsK |
|---|
| ID | 1045627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2805223 |
|---|
| End bp | 2806131 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637145883 |
|---|
| Product | ribokinase |
|---|
| Protein accession | NP_744606 |
|---|
| Protein GI | 26989181 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCA AGGTTGTGGT GGTTGGCAGC CTCAACATGG ACCTGGTGGT CCGCGCCCAG
CGCCTGCCGC GGGCCGGCGA AACACTCCCC GGCGATAGCT TTTTCACGGT GCCGGGCGGC
AAGGGTGCCA ACCAGGCGGT GGCAGTGGCG CGGCTGGGCG GCAGCGTGGC TATGATCGGC
AATGTGGGGG ATGACGACTA CGGGCGGCAA CTGCACCGGG CCTTGTATGT CGAGGGGATC
GACTGTCAGG GCGTCAGCAC CTGTCCAGCC ATGTCCAGCG GTGTGGCGCT GATCACGGTG
GATGCTGCCA GCCAGAACTG TATTGTCATC ATTCCCGGCG CCAACGGCCT GCTGACGCCG
CAGTCGGTGC GGCGCTTCGA TGCGTTGCTG CAGGCTGCCG AGGTAATCAT CTGCCAGTTG
GAAGTGCCAG CCAGCACCGT GGCCTGGACA CTGGCCAGAG GGCACGAGCT GGGCAAGCAG
GTGATCCTGA ACCCAGCACC CGCTACCGGC CCCTTGCCAG CGGACTGGTT TGCGCATATC
GATTACCTTA CCCCTAACGA AAGTGAGGCC GAAGCCTTGA CCGGTGTGGT GGTGACCGAC
CAGGACAGTG CCCGGCGCGC GGGCGAGCGC TTGCTGCAGC TGGGGGCAGG CAAAGTGATC
ATCACCTTGG GTGCGCAAGG TGCCTTGCTG GTTACTGCCC AAGGTCATCA GCACTATCCG
GCGCCGCACG TGCAACCGCT GGACACCACC GCTGCCGGCG ATACCTTCAT CGGTGGCTTT
GCTGCCGGCC TGGTGCGTGG GCTGGAGGAG GGGGAGGCGA TCGCCTTTGG CCAGCGTGCT
GCAGCATTGT CGGTTACCCG TGCCGGTGCC CAACCGTCGA TTCCCTACCT GGCAGAGCTG
ACGCCATGA
|
|---|
| Protein sequence | MNAKVVVVGS LNMDLVVRAQ RLPRAGETLP GDSFFTVPGG KGANQAVAVA RLGGSVAMIG
NVGDDDYGRQ LHRALYVEGI DCQGVSTCPA MSSGVALITV DAASQNCIVI IPGANGLLTP
QSVRRFDALL QAAEVIICQL EVPASTVAWT LARGHELGKQ VILNPAPATG PLPADWFAHI
DYLTPNESEA EALTGVVVTD QDSARRAGER LLQLGAGKVI ITLGAQGALL VTAQGHQHYP
APHVQPLDTT AAGDTFIGGF AAGLVRGLEE GEAIAFGQRA AALSVTRAGA QPSIPYLAEL
TP
|
|---|
| |