Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2444 |
Symbol | |
ID | 1045613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2791642 |
End bp | 2792535 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145867 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744592 |
Protein GI | 26989167 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTAACT ATCGCCAGTT GCATTACTTC TGGGCCGTGG CCAAGACGGG CAGCATCACC CGCGCCAGCC AACAGCTGAA CCTCACACCG CAAACCATCA GCGGGCAGAT CACCCTGTTC GAGCAAACCT ACGGCCTGGA ACTGTTCCAG CGCGCTGGCC GGCAGCTGGA ACTGACAGAA ACCGGCCGTC AGGCCCTGGT GTATGCAGAG CAGATGTTTC AGATCGGCAG CGAGCTTGAA GCCATGCTGC GTGCCGGCCC TCAAGAGCAG ATCCTGTTCC GTGTGGGGGT GGCTGACGTG GTGCCCAAAT CCATTGTCTA CCGCCTGCTG GCACCGACCA TGGACCTGGA GGAGGTGCTG CGCATCAACT GCCGCGAGGA CAAACTTGAG CGGTTACTGG CAGACCTGGC TATCCAGCGC CTGGACCTGG TGATATCCGA CAGCCCCATG CCTAACCACC TGGACATCAA GTGCTACAGC CAAAAGCTGG GCGAGTGCGG GCTGAGCTTC TTCGCCACCC CGGCGCTGGC ACAACGGCTT GAAGGTCCTT TTCCAGCTTG CCTGCAGGAT GCTCCGCTGC TGGTTCCCGG CCAGGAGACC GTGGTACGCA GCCGCCTGCT GCGGTGGCTG GGCGAGCAGC AGGTGCAGCC ACGGATCGTG GGGGAGTTCG ATGACAGTGC CTTGATGCAA GCGTTCGGAC AGTCGGGCAG CGGCATTTTC GTAGCGCCCA GCGTAATCGC CGAGGAGGTG TGCCGTCAGT ATGGCGTGCA ACTGATCGGG CAGACCGAGG CCGTGCACGA ATCGTTCTAT GCCATTTCGG TGGAGCGCAA GGTCAAGCAC CCAGGGATCG TGGCGATTAC CGAGGGGGCG CGGCGGGAGT TGTTTCACTG GTAG
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Protein sequence | MLNYRQLHYF WAVAKTGSIT RASQQLNLTP QTISGQITLF EQTYGLELFQ RAGRQLELTE TGRQALVYAE QMFQIGSELE AMLRAGPQEQ ILFRVGVADV VPKSIVYRLL APTMDLEEVL RINCREDKLE RLLADLAIQR LDLVISDSPM PNHLDIKCYS QKLGECGLSF FATPALAQRL EGPFPACLQD APLLVPGQET VVRSRLLRWL GEQQVQPRIV GEFDDSALMQ AFGQSGSGIF VAPSVIAEEV CRQYGVQLIG QTEAVHESFY AISVERKVKH PGIVAITEGA RRELFHW
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