Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2439 |
Symbol | ahpC |
ID | 1045608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2786987 |
End bp | 2787550 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637145862 |
Product | alkyl hydroperoxide reductase, C subunit |
Protein accession | NP_744587 |
Protein GI | 26989162 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATCA TCAACAGCCA GGTCAAACCC TTCAACGCCA CCGCCTACCA CAAAGGCGAG TTCGTTCAGG TCAGCGAAGC CGATCTGAAA GGCAAGTGGT CTGTCGTGTT CTTCTACCCG GCCGACTTCA CCTTCGTTTG CCCGACCGAG CTGGGTGACC TTGCTGACAA CTACGCCGAG TTCCAGAAGC TGGGCGTGGA AATCTACGGT GTTTCCACTG ACACCCACTT CACTCACAAA GCCTGGCACG ACACTTCGGA CACCATCGGC AAGATCGAAT ACCCGCTGAT CGGTGACCCG ACTCACGTCA TTTCGCGCAA CTTCGACGTG CTGATCGAAG AAGCCGGCCT GGCCGACCGC GGTACCTTCG TGATCAACCC GGAAGGCCAG ATCAAGATTG TCGAGCTGAA CGACGGTGGT GTAGGCCGTG ATGCTGCTGA GCTGCTGCGT AAGGTCAAGG CTGCCCAGTA CGTTGCCGCT CACCCAGGCG AAGTGTGCCC GGCCAAGTGG AAAGAAGGCG AAGCCACTCT GGCGCCGTCG CTGGACCTCG TAGGCAAGAT CTAA
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Protein sequence | MPIINSQVKP FNATAYHKGE FVQVSEADLK GKWSVVFFYP ADFTFVCPTE LGDLADNYAE FQKLGVEIYG VSTDTHFTHK AWHDTSDTIG KIEYPLIGDP THVISRNFDV LIEEAGLADR GTFVINPEGQ IKIVELNDGG VGRDAAELLR KVKAAQYVAA HPGEVCPAKW KEGEATLAPS LDLVGKI
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