| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2407 |
|---|
| Symbol | aroQ-2 |
|---|
| ID | 1045534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2750483 |
|---|
| End bp | 2750932 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637145830 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | NP_744555 |
|---|
| Protein GI | 26989130 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0668809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCC TTATTCTCGT GCTCAACGGC CCCAACCTGA ACATGCTGGG CACCCGCGAG
CCTGCCCAGT ACGGCCACGA AACCCTCGCT GACCTGGCTC AGGGATGTGC CGACACTGCC
CACGCCCACG GCCTGGAAAT CGAGTTCCGC CAGACCAACC ACGAAGGTGA ACTGATCGAC
TGGATCCACG CCGCCCGTGG CCGCTGCGCC GGCATCGTGA TCAACCCCGG CGCCTGGACG
CACACCTCGG TCGCCATCCG CGATGCCCTG GTGGCCAGCG AACTGCCGGT GATCGAGGTG
CACCTGTCCA ATGTGCACAA ACGCGAGCCG TTCCGTCACT TGTCGTTCGT ATCGTCCATC
GCCGTCGGTG TCATCTGCGG CCTGGGCAGC CACGGCTACC GCATGGCGCT GAGCCACTTC
GCCGAGCTGT TGCAGGAGCG TGCGGCATGA
|
|---|
| Protein sequence | MKPLILVLNG PNLNMLGTRE PAQYGHETLA DLAQGCADTA HAHGLEIEFR QTNHEGELID
WIHAARGRCA GIVINPGAWT HTSVAIRDAL VASELPVIEV HLSNVHKREP FRHLSFVSSI
AVGVICGLGS HGYRMALSHF AELLQERAA
|
|---|
| |