Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2347 |
Symbol | |
ID | 1045346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2676992 |
End bp | 2677660 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145770 |
Product | winged helix family two component transcriptional regulator |
Protein accession | NP_744496 |
Protein GI | 26989071 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000302018 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCCTGT TGCTTGTCGA GGACAACGTA CCGTTGGCCG ATGAACTGAC CGCCGGCCTG CAGCGCCAGG GCTATGCCGT GGACTGGCTG GCTGATGGCC GTGACGCGGT TTACCAGGGG CAAAGCGAGC CTTACGACCT GATCATCCTG GACCTCGGCC TGCCTGGCTT GCCCGGCCTG GATGTGCTGG CCCAGTGGCG TGCCGCTGGC CTGGCCACAC CGGTATTGAT CCTCACCGCC CGCGGCTCCT GGGCCGAGCG CATCGAAGGG CTGAAGGCCG GGGCTGACGA TTACCTGAGC AAACCCTTCC ACCCCGAAGA GCTGCAACTG CGCATCCAGG CGTTGCTGCG CCGCGCCCGG GGCCTGGCCA ATCAGCCGAA GCTGGAAGCG GCCGGCCTGC ACCTTGACGA AAGCCGTCAG TGCGTGAGCC GCGATGGGGT GGATGTGCAA CTGACCGCCG CCGAGTTCCG CCTGCTGCGC TACTTCATGC TGCACCCGCA GCAGATCCTG TCCAAAAGCC ACCTGGCCGA GCACCTCTAC GACGGTGAAA CCGAGCGCGA CTCGAACGTG CTGGAGGTCC ATGTCAACCA TTTGCGCCGC AAGCTGGGCC GCAGCGTGAT CGAAACCCGT CGCGGGCAAG GCTACATCTA TGCCGGGAGC GGCGAGTGA
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Protein sequence | MRLLLVEDNV PLADELTAGL QRQGYAVDWL ADGRDAVYQG QSEPYDLIIL DLGLPGLPGL DVLAQWRAAG LATPVLILTA RGSWAERIEG LKAGADDYLS KPFHPEELQL RIQALLRRAR GLANQPKLEA AGLHLDESRQ CVSRDGVDVQ LTAAEFRLLR YFMLHPQQIL SKSHLAEHLY DGETERDSNV LEVHVNHLRR KLGRSVIETR RGQGYIYAGS GE
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