Gene PP_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2310 
Symbol 
ID1045297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2639175 
End bp2640653 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content64% 
IMG OID637145733 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionNP_744459 
Protein GI26989034 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.178377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.73933e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGTGCCT GGCTTAGCAA TGTTTCCCTG AAGTACAAAT TCTGGGCCGT CAACGCAGTG 
GCCTTTGTCA CCACCTTGCT GCTGGTGCTG TACGCCGTGC ACCTGGAGCA ACGCGCACGT
GCAGAGGCGG CTCAGGCCCA GGCGGCCGCG CAAGCCCAGT TGCTGGCCGC CTGGCCAGCC
GGGCAAGCAC TGCCACGCCC GGCCAACGTC ATCAGTTGGT CAACCGGGCA AACGCCAACC
TACGCCGGGG AGGCGCTCGA TGCCCTGCGC AACGCCCAAG GCTGGGTAGC ATTGCCGAGC
GCCTGGATCC TCGGTGAAAA CCCGCCGCGT GGCGCACAGG TATTGCGCAA TGGCGACCAG
CAGTTGGCTG TGCTGGCCCA GTCGCCCAGC CTGCGCCAGG TCTTCTTCGA TCGCTTCAGC
AATTACGCGG TGTGTGTGCT GATCCTGATG CTGGCCATGC TCGGCGCCTC GCAACTGCTG
ATCCGCTTCC TGCTCAGCCA ACTCAACACC CTCAAGGACG TGATGCTGCA CGTGGAAAAA
ACCGGCGACC TGTCGGCCCG CGTACCGCTA GCCAGTGGCG ACGAGGTCGG CCAGATGGCC
GGAGCCTTCA ACGCCATGCA GTCCACCTAT CACCGCGTGG TCAGCACCGT CGCCCACAGC
GCAGCACAGC TGGACTCGGG CGCTGCACGC CTGGCCGCCA GCATGAGCGA CGTACGCCAT
GGCATGCTCG GCCAGCAGAG TGAAACCGAC CAGGCCGCCA CTGCCATCAA CGAAATGTCG
GCGACCGTGC ACCACATTGC CCAGCACGCC GGTGCCACCC GCGATTTGTC ACAAACCGCC
GACACCTTGG CCGGCAGCGG CCAAGCGGTA GTCAGCCGAG TGCAGGATTC GATTTCCGGG
CTTTCCAGCG GCGTGCAACA AACTGCCGAG ATGATTCGAC AACTAGCCGA GGACAGCCAG
AAGATCAACG GTGTAGTCAG TGTGATCCAC AGTATTGCCG AACAGACCAA CTTGCTGGCG
CTTAACGCTG CCATCGAAGC CGCGCGCGCC GGCGACCTAG GCCGTGGCTT TGCCGTGGTG
GCCGATGAAG TGCGCAACCT GGCCAAACGC GTGCAAACCT CCACGGATGA GATCACCACC
ATGGTTTCGG CCCTGCAGTC GGGCACCCGC GATGCGGTGG AGTTCATGCA GGAGAGCTCG
TACAAGGCCG ACGACTGTGT GCGTCAGGCA CAGGAAGCCG GTGAGGCGCT GGCTGAAATC
ACCGGTGCCG TGGCGCAGAT GCGCGAAAGC AATACCCAGA TCGCTGTAGC GGCCGAGCAG
CAAAGCCAGG TAGCCGAGGA AATGAACCGC GCGGTGGTCA GCATCCGCGA TGTCACCGAG
CGGACCGTGC AGCAGACGGT CGGTTCGGCG ACCACCAGCA GCGAACTGGC GACCCTGGCC
GGCGAACTGA ACAAGGCCAT TGGCCAGCTC AAGCTATAG
 
Protein sequence
MGAWLSNVSL KYKFWAVNAV AFVTTLLLVL YAVHLEQRAR AEAAQAQAAA QAQLLAAWPA 
GQALPRPANV ISWSTGQTPT YAGEALDALR NAQGWVALPS AWILGENPPR GAQVLRNGDQ
QLAVLAQSPS LRQVFFDRFS NYAVCVLILM LAMLGASQLL IRFLLSQLNT LKDVMLHVEK
TGDLSARVPL ASGDEVGQMA GAFNAMQSTY HRVVSTVAHS AAQLDSGAAR LAASMSDVRH
GMLGQQSETD QAATAINEMS ATVHHIAQHA GATRDLSQTA DTLAGSGQAV VSRVQDSISG
LSSGVQQTAE MIRQLAEDSQ KINGVVSVIH SIAEQTNLLA LNAAIEAARA GDLGRGFAVV
ADEVRNLAKR VQTSTDEITT MVSALQSGTR DAVEFMQESS YKADDCVRQA QEAGEALAEI
TGAVAQMRES NTQIAVAAEQ QSQVAEEMNR AVVSIRDVTE RTVQQTVGSA TTSSELATLA
GELNKAIGQL KL