| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2185 |
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| Symbol | |
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| ID | 1045046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2490575 |
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| End bp | 2493457 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637145599 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | NP_744334 |
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| Protein GI | 26988909 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.602321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAATT TCTTCGACCC CGCTTCTGAT AAAAGCAGCG ACCTCGGCAC CCCGGCCCGC
GAAAGCGACG TGCAGGTCAG CCTGAGCATC GACGGCCGCG CCATCAGCGT GCCTGCTGGC
ACCTCGGTCA TGCGCGCCGC CGCCATGCTG GGCACCAGCA TCCCCAAACT GTGCGCCACC
GACAGCCTCG AAGCCTTCGG CTCCTGCCGC ATGTGCATGG TGGAAATCGA AGGCATGCGC
GGCTACCCGG CATCCTGCAC CACGCCAGTC AGCGAAGGCA TGGTGGTGCG CACCGAAACC
CCGCGCCTGG CCGGCCTGCG CCGCAACGTG ATGGAGCTGT ACATTTCCGA CCACCCGCTG
GACTGCCTGA CCTGTTCGGC CAACGGTAAC TGCGAGCTGC AGACCGTCGC CGGCCAGGTG
GGCCTGCGTG AGGTGCGCTA CGGCTATGAC GGTGCCAACC ACCTGGACGA GAAAAAAGAC
GTTTCCAACC CGTATTTCGA CTACGAGCCG AGCAAGTGCA TCGTCTGCAG CCGCTGTGTG
CGCGCCTGCG AGGACATCCA GGGTACGTTC GCCCTGACCA TTACCGGGCG TGGTTTCGAA
TCGCGGGTGG CGGCAGCGGG TGGCGAAAAC TTCCTTGCGT CCGAATGCGT GTCGTGCGGC
GCCTGCGTGC AGACCTGTCC GACCGCGACC CTCACGGAAA AGAGCCTGGT GCAGCTTGGC
CAGCCTGAGC GTTCGGTCAT TACCACCTGC GCCTACTGCG GCGTTGGCTG CTCGTTCCGC
GCTGAAATCA AGGGTGACCA GCTGGTGCGC ATGGTCCCGG ACAAGAACGG TGGCGCCAAC
CACGGCCACG CCTGCGTCAA GGGCCGCTTT GCCTGGGGCT ATGCCACCCA CCCGGACCGC
ATCACCAAAC CGATGATCCG CAAGCGCCTG GAAGACCCGT GGCAGGAAGT CAGCTGGGAC
GAGGCCGTGA CCTATGCCGC CAGCGAGTTC CGCCGCATCC AGCTCAAATA CGGGCGCGAC
TCCATCGGCG GTATCACCTC CAGCCGCTGT ACCAACGAAG AAGCCTATCT GGTGCAGAAA
CTGGTGCGCA CGGCCTTCGG TAACAACAAC GTCGACACCT GCGCACGGGT ATGCCATTCG
CCCACCGGTT ATGGCCTGAA GCAGACCCTG GGTGAGTCGG CCGGCACGCA AAGCTTCGAC
TCGGTGATGC AGGCCGACGT TGTGCTGGTG ATTGGCGCCA ACCCCACCGA TGCGCACCCG
GTGTTCGGCT CGCAACTCAA GCGCCGCCTG CGCCAAGGGG CGCGGCTGAT CGTGATCGAC
CCACGGCGTA TCGACCTGGT CGACTCGCCG CACGCCCGCG CCGACCTGCA CCTGCAACTG
CGCCCGGGCA CCAACGTGGC CATGCTCAAC GCCCTGGCCC ACGTGATCGT CACCGAGGGC
CTGCTGGCCC AAAGCTTCAT CGATGCCCGC TGCGAAACCG GAGACTTCGC CCGTTGGCGC
GACTTCGTCA GCCTGCCAGA CAACGCCCCC GAGGTGCTCG GCCCGGTTTG TGGCGTGCCC
GCCGAGCAGA TCCGCGCTGC GGCCCGGCTG TATGCCACCG GCGGCAACGC GGCCATCTAC
TACGGCCTGG GGGTGACCGA GCACAGCCAA GGCAGTACCG CAGTGATGGG CATCGCCAAC
CTGGCCATGG CCACTGGCAA CATCGGCCGT GAAGGGGTAG GGGTGAACCC GCTGCGCGGG
CAGAACAACG TGCAGGGCTC GTGCGACATG GGCTCGTTCC CCCACGAGCT GCCCGGCTAC
CGGCATGTCT CCAACGAGGG CGTGCGCGCC GAGTTCGAAC AGGCGTGGGG CGTGACCTTG
CAGCCCGACC CGGGTCTGCG CATTCCCAAC ATGTTCGAGG CGGCGCTGGA TGGCAGCTTC
AAGGCGCTGT ACTGCCAGGG TGAGGACATC GCCCAGAGCG ACCCCAACAC CCAGCACGTC
ACCGCGGCCT TGCTGGCCAT GGAGTGCGTG GTGGTGCAGG ACATCTTCCT CAACGAAACT
GCCAAGTTCG CCCATGTGTT CCTGCCGGGC AGTTCGTTCC TGGAAAAGGA CGGCACCTTC
ACCAACGCCG AGCGGCGTAT TTCGCGGGTG CGCAAGGTCA TGGAGCCGCT GGCCGGCAAG
GCCGACTGGG AAGCTACCGT GGCCCTGGCC AACGCCCTGG GCTACCCGAT GAACTACCGC
CATCCTTCCG AGATCATGGA CGAGATCGCC CGCCTGACGC CGACCTTCCG TCGTATCAGC
TACGCGGAAC TCGACCGCCA TGGCAGCCTG CAGTGGCCGT GCAACGACGC TGCCCCAGAC
GGCACGCCGA CCATGCACAT CGACCAGTTC GTGCGTGGCA AGGGGCGCTT CATGCTCACC
GGCTACGTGC CCACCGACGA AAAGGTCAAC AACCGCTACC CGTTGCTGCT GACCACCGGG
CGCATTCTCA GCCAGTACAA CGTCGGCGCC CAGACCCGGC GTACCGGCAA CGTCGCCTGG
CATGACGCCG ACCGCCTGGA GATCCACCCG ACCGACGCTG AAAGCCGTGG CATCCAAGAC
GGTGACTGGG TCGGCATCGG CAGCCGCGCC GGGCAGACTG TGCTGCGTGC CAAGGTCAGT
ACGCGGGTGG CGCCGGGAGT GGTGTACACC ACCTTCCACT TCCCAGAGTC GGGGGCCAAC
GTGATCACCA CCGACAACTC CGACTGGGCC ACCAACTGCC CCGAGTACAA GGTGACGGCA
GTGGAAGTGG TGAAAGTGTT CCAGCCATCG CAATGGCAGA AGCGCTATCA GGACTTCAGT
GATGAACAGC AGCGGCTACT GAAAGAGCGC CGCACTGCGG AGAAAGCCGA GGTTCGCCGA
TGA
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| Protein sequence | MINFFDPASD KSSDLGTPAR ESDVQVSLSI DGRAISVPAG TSVMRAAAML GTSIPKLCAT
DSLEAFGSCR MCMVEIEGMR GYPASCTTPV SEGMVVRTET PRLAGLRRNV MELYISDHPL
DCLTCSANGN CELQTVAGQV GLREVRYGYD GANHLDEKKD VSNPYFDYEP SKCIVCSRCV
RACEDIQGTF ALTITGRGFE SRVAAAGGEN FLASECVSCG ACVQTCPTAT LTEKSLVQLG
QPERSVITTC AYCGVGCSFR AEIKGDQLVR MVPDKNGGAN HGHACVKGRF AWGYATHPDR
ITKPMIRKRL EDPWQEVSWD EAVTYAASEF RRIQLKYGRD SIGGITSSRC TNEEAYLVQK
LVRTAFGNNN VDTCARVCHS PTGYGLKQTL GESAGTQSFD SVMQADVVLV IGANPTDAHP
VFGSQLKRRL RQGARLIVID PRRIDLVDSP HARADLHLQL RPGTNVAMLN ALAHVIVTEG
LLAQSFIDAR CETGDFARWR DFVSLPDNAP EVLGPVCGVP AEQIRAAARL YATGGNAAIY
YGLGVTEHSQ GSTAVMGIAN LAMATGNIGR EGVGVNPLRG QNNVQGSCDM GSFPHELPGY
RHVSNEGVRA EFEQAWGVTL QPDPGLRIPN MFEAALDGSF KALYCQGEDI AQSDPNTQHV
TAALLAMECV VVQDIFLNET AKFAHVFLPG SSFLEKDGTF TNAERRISRV RKVMEPLAGK
ADWEATVALA NALGYPMNYR HPSEIMDEIA RLTPTFRRIS YAELDRHGSL QWPCNDAAPD
GTPTMHIDQF VRGKGRFMLT GYVPTDEKVN NRYPLLLTTG RILSQYNVGA QTRRTGNVAW
HDADRLEIHP TDAESRGIQD GDWVGIGSRA GQTVLRAKVS TRVAPGVVYT TFHFPESGAN
VITTDNSDWA TNCPEYKVTA VEVVKVFQPS QWQKRYQDFS DEQQRLLKER RTAEKAEVRR
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