Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2159 |
Symbol | |
ID | 1045017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2466512 |
End bp | 2467039 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637145573 |
Product | plastocyanin/azurin family copper binding protein |
Protein accession | NP_744308 |
Protein GI | 26988883 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4454] Uncharacterized copper-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0076427 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.727347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACACC TGTTCATTAC CGCCACCCTT GCCCTGGGCA GCCTGCCGGC TTTCGCTGGC CAGGCGCAGA GCTTCGCCTT TGGCGAGCCT GCCCCGGCGG CCAAGGCCAC CCGTACGGTC AACGTGGTGC TCAAGGACAT CGCCTTCGAG CCAAAAAGCC TGCAGGTAAA AGCCGGCGAG ACGGTGCGCT TCTTGCTGGT CAACGAGGGC AAGCTGCCGC ACGAATTCAA CCTGGGCGAC AAGGCCATGC ATGCCGAACA CCAGAAGGAA ATGGTCGCCA TGCAAGGCAA GATGTTCACC GAGGCGATGA ACCACGAAGG TATGGATCAC GGCAAGATGA TGAACCACGG CCAAATGATG GACCATGGTG ACGGCCATGG TCACGGGGGT GGCAACACTG TGATGGTCAT GCCCGGCCAG CGCGCCGAAC TGACCTGGAC CTTCCGCCAA TCGGCGCCCA TCGAGTTTGC ATGCAACGTG CCGGGGCATT ACCAGGCGGG TATGGTCGGG GCATTGACCA TTGAGTGA
|
Protein sequence | MKHLFITATL ALGSLPAFAG QAQSFAFGEP APAAKATRTV NVVLKDIAFE PKSLQVKAGE TVRFLLVNEG KLPHEFNLGD KAMHAEHQKE MVAMQGKMFT EAMNHEGMDH GKMMNHGQMM DHGDGHGHGG GNTVMVMPGQ RAELTWTFRQ SAPIEFACNV PGHYQAGMVG ALTIE
|
| |