Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2158 |
Symbol | |
ID | 1045016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2465631 |
End bp | 2466311 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145572 |
Product | two component heavy metal response transcriptional regulator |
Protein accession | NP_744307 |
Protein GI | 26988882 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.144347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.036827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC TGATCGTCGA AGACCAGGCC CGCACCGGCC AGTACCTGAG CCAAGGCCTG AGCGAGGCCG GGTTTGCCAC CGAATTGGCC ACCGATGGCG AGACCGGCCA GTTCCTCGCC CTGACCGGCG ACCACGACCT GCTGATCCTC GACGTGATGC TGCCCGGCCG CGACGGCTGG CAGATCCTTC AGGCCGTGCG CCAGGCTGGC CTGGATACGC CAGTGCTGTT CCTGACCGCC CGCGACGCCG TCGAGGATCG CGTGCATGGC CTGGAACTGG GCGCCGACGA CTACCTGGTC AAGCCGTTCG CCTTTTCCGA GCTGCTGGCC CGGGTACGCA GCCTGCTGCG CCGTGGCACC AGCCCGAGCC AGGACACGAT CCTGAGCCTG GCTGACCTGC GCCTGGACCT GATCCGCCGC CGCGCCGAGC GTGCCGGGCT GCGCATCGAC CTGACCGCCA AGGAGTTCTC ACTCCTTGAG CTGCTGCTGC GCCGCCAGGG TGAGGTGCTG CCAAAATCGC TGATCGCCTC GCAGGTGTGG GACATGAACT TCGACAGCGA CACCAATGTG ATCGAAGTGG CCATCCGCCG CCTGCGCCTG AAAATCGACG ACCCGCACCC CAACAAGCTG ATCCACACCG TCCGCGGCAT GGGTTACGTA CTCGAAGAGC GCACCGAGTG A
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Protein sequence | MKLLIVEDQA RTGQYLSQGL SEAGFATELA TDGETGQFLA LTGDHDLLIL DVMLPGRDGW QILQAVRQAG LDTPVLFLTA RDAVEDRVHG LELGADDYLV KPFAFSELLA RVRSLLRRGT SPSQDTILSL ADLRLDLIRR RAERAGLRID LTAKEFSLLE LLLRRQGEVL PKSLIASQVW DMNFDSDTNV IEVAIRRLRL KIDDPHPNKL IHTVRGMGYV LEERTE
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