Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2156 |
Symbol | lolE |
ID | 1045014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2463001 |
End bp | 2464242 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145570 |
Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
Protein accession | NP_744305 |
Protein GI | 26988880 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.775226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0206091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGAC CCTTGCCCAT CTTTATCGGC GCGCGCTACA CCCGAGCCAA GCGTCGCAAC CACTTCATCT CGTTCATTTC GATGACTTCG ATGATCGGCC TGTCGCTGGG CGTGCTGGCA ATGATCGTGG TGCTGTCGGT AATGAACGGC TTCCAGCGCG AAATGAGCTC GCGCATTCTC GGCCTGGTGC CGCATGCCGC CATCCTGGGC GTGCAGCCGG TGGACGACTG GCACAAGGTG GCCGACGCAG CCATGAAGAA TCCGGCGGTG ATGGCGGTGG CGCCGATTAC CGAGATGGAA GGCATGCTGT CGTACAAGGG CGCCATGCAG CCGATCCAGG TGGGTGGTAT CGACCCGGCC GAGGAGGGCA AGGTTTCCAT CGTTGGCCAG CACATCGTCC AGGGCCGCCT GCAGGGCTTG CAGCCCGGTG AATTCGGCGT GGTCATCGGC GAGCTGACCG CACGCCGCTT CCGCCTGAAT ACCGGCGACA AGCTGACCTT GATCGTGCCG GAAATCAGCA AGGAACCGGG TGGTATCACC CCGCGCATGC AGCGCCTCAC CGTGGTCGGC ATCTTCAAGG TTGGCGCCGA GCTGGATGGG TCGCAGGCTT ATATCCATGT TGCTGATGCA GCCGAGATGC AGCGCTGGGC GCCAGGCCAG GTGCAAGGTG TGCGCCTGAA GCTGCACGAC CTGTATGCCG CTCCGCAGGT GTCCAAGGCG ATTGCTGCCG GGCTTGGGGA CGCCTACCGG GCCGATGACT GGTCGCATAC CCAGGGCAGC CTGTTCAGCG CCATGAAGAT GGAAAAGACC ATGATCGGCC TGTTGCTGAT GATGATCATC GCGGTAGCGG CGTTCAATAT CATCGCCACC CTGGTGATGG TGGTGAACGA CAAGGGGCCG GACATTGCCA TCCTGCGTAC CTTGGGCGCC ACGCCGGCGC AGATCATGGG TACGTTCATG GTCCAGGGCA GCCTGATCGG CATTGTCGGC ACGCTGATTG GTGGTGTACT GGGCGTGATT GCGGCGTTCA ATGTCAGCCA GATCGTCGGC TGGCTGGAGC GGGTGAGCGG GCAACACATC TTTACGTCGG ATGTGTACTT CGTCAGCAGC TTGCCGTCGC AGTTGCAGTG GGGGGATGTG GCGATCATCT GCACCGCCGG CCTGGTGATG AGTTTCCTGG CGACCATTTA CCCGGCCTAC CGGGCGTCGC AGGTGCAGCC GGCGATTGGC CTGGCGGTTT GA
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Protein sequence | MFRPLPIFIG ARYTRAKRRN HFISFISMTS MIGLSLGVLA MIVVLSVMNG FQREMSSRIL GLVPHAAILG VQPVDDWHKV ADAAMKNPAV MAVAPITEME GMLSYKGAMQ PIQVGGIDPA EEGKVSIVGQ HIVQGRLQGL QPGEFGVVIG ELTARRFRLN TGDKLTLIVP EISKEPGGIT PRMQRLTVVG IFKVGAELDG SQAYIHVADA AEMQRWAPGQ VQGVRLKLHD LYAAPQVSKA IAAGLGDAYR ADDWSHTQGS LFSAMKMEKT MIGLLLMMII AVAAFNIIAT LVMVVNDKGP DIAILRTLGA TPAQIMGTFM VQGSLIGIVG TLIGGVLGVI AAFNVSQIVG WLERVSGQHI FTSDVYFVSS LPSQLQWGDV AIICTAGLVM SFLATIYPAY RASQVQPAIG LAV
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