| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2154 |
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| Symbol | lolC |
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| ID | 1045011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2460999 |
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| End bp | 2462249 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637145568 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | NP_744303 |
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| Protein GI | 26988878 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0219351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAC CTCTTTTCGC ATTCATCGGC ACGCGTTATA CCCGTGCCAA ACGTCGCAAT
CACTTCGTCT CGTTCATTTC CCTGACCTCG ATGATCGGCC TCGCCCTGGG CGTGGTGGTA
ATGATCGTGG TGCTGTCGGT GATGAACGGT TTCGACCATG AGATGCGCAC CCGCGTGTTG
GGGATGATTC CCCATGCCAC GCTGGAGAGC GGCCAGCCCA TTGCCGACTG GCAGGCCCTT
GCCCAACAAG TAAAGCAGAA TCCGCAGGTG GTAGCGGTTG CGCCGTTCAC CCAGATGCAG
GGCCTGCTGA CCCATGATGG CAAGGTGCAG AAGGTGCTGC TCAATGGCAT CGACCCCGCT
CGCGAGCGCG AGGTGTCGAT CATCGACAAC TTCGTCCTGC AAGGCCGCCT GGACCAGTTG
GCGCCGGGCG AGTGGGGCAT CATGATCGGC GACAAGGCGG CGGCCAAGCT CGGCGTTGCC
ATCGGCGACA AGCTCACCTT CGTCGCCCCC GAGGTCAGCG TGACCCCCGC CGGCATGTTC
CCGCGCATGA AGCGCTTCAC CGTGGTTGGC ACCTTCCACG TTGGCGCGGG GGAGATCGAC
GGCTACCTGG GCCTGACCAA CATCAGCGAC CTGTCCCGCC TGCACCGCTG GAAGCCCGAC
CAGGTCCAGG GCCTGCGCCT GAAGTTCGAC GACCTGTTCC AGGCGCCGCG CGTAGCCTGG
AGCATCGCCC AGCAGCTGGG CGACCAGGAA TTCTATAGCC GTGACTGGAC CCGTACCCAC
GGCAACCTGT ACCAGGCGAT CCGTATGGAA AAGGCCATGA TCGGCCTGCT GTTGCTGCTG
ATCGTGGCGG TGGCGGCGTT CAACATCATT TCCACCCTGG TGATGGTGGT CAACGACAAG
CGCGGCGACA TCGCCATCCT GCGCACCCTG GGCGCCACGC CCGGGCAGAT CATGCTCATC
TTCATGGTCC AGGGCACGGT GATCGGGGTG ATCGGTACGC TGATCGGCGC CGTGGTCGGG
ATCTTCGCGG CACTGAACGT GAGCGCGGCG ATCGCCGGCA TCGAGACACT GATCGGCCAC
AAGTTCCTCA ACGCCGACGT GTACTTCATC GATTACCTGC CGTCGCAGAT CCTGGCCCAG
GACGTGTACA TGGTCTGTGG AGCGGCACTG GTCCTGAGTT TCTTCGCCAC CCTGTATCCG
GCCTGGCGTG CGGCCCGCAC CCAGCCTGCA GAGGCGCTAC GTTATGAGTG A
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| Protein sequence | MFRPLFAFIG TRYTRAKRRN HFVSFISLTS MIGLALGVVV MIVVLSVMNG FDHEMRTRVL
GMIPHATLES GQPIADWQAL AQQVKQNPQV VAVAPFTQMQ GLLTHDGKVQ KVLLNGIDPA
REREVSIIDN FVLQGRLDQL APGEWGIMIG DKAAAKLGVA IGDKLTFVAP EVSVTPAGMF
PRMKRFTVVG TFHVGAGEID GYLGLTNISD LSRLHRWKPD QVQGLRLKFD DLFQAPRVAW
SIAQQLGDQE FYSRDWTRTH GNLYQAIRME KAMIGLLLLL IVAVAAFNII STLVMVVNDK
RGDIAILRTL GATPGQIMLI FMVQGTVIGV IGTLIGAVVG IFAALNVSAA IAGIETLIGH
KFLNADVYFI DYLPSQILAQ DVYMVCGAAL VLSFFATLYP AWRAARTQPA EALRYE
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