| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2136 |
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| Symbol | fadB |
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| ID | 1044991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2437078 |
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| End bp | 2439225 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637145550 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | NP_744285 |
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| Protein GI | 26988860 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.434411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.123544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTACG AAGGTAAAGC CATCACGGTT AAGGCTCTTG AAAGTGGCAT CGTCGAGCTC
AAGTTCGACC TCAAGGGTGA GTCCGTCAAC AAGTTCAACC GCCTTACCCT GAACGAGCTG
CGCCAGGCCG TCGATGCCAT CCGGGCCGAT GCTTCGGTCA AGGGCGTGAT CGTCAGGAGT
GGCAAGGACG TGTTCATCGT CGGCGCCGAC ATCACCGAGT TCGTCGACAA CTTCAAGCTG
CCTGAGGCCG AACTGGTCGC TGGCAACCTG GAAGCCAATC GCATCTTCAA CGCGTTCGAA
GACCTCGAAG TGCCGACCGT TGCCGCCATC AACGGCATCG CGCTGGGCGG CGGCCTGGAA
ATGTGCCTGG CGGCCGACTA CCGGGTCATG TCCACCAGCG CCAGGATCGG CCTGCCGGAA
GTCAAGCTGG GTATCTACCC GGGCTTTGGC GGTACCGTGC GCCTGCCGCG CCTGATCGGC
TCGGACAACG CCATCGAGTG GATCGCCGCC GGCAAGGAAA ACCGTGCCGA AGATGCCCTG
AAAGTGGGGG CCGTCGACGC CGTGGTCGCC CCTGAGCTGC TGCTGGCCGG TGCCCTCGAC
CTGATCAAGC GTGCCATCAG TGGCGAGCTG GACTACAAGG CCAAGCGCCA GCCGAAGCTG
GAAAAGCTCA AGCTCAATGC CATCGAGCAG ATGATGGCCT TCGAGACTGC CAAGGGCTTC
GTCGCTGGCC AGGCCGGCCC GAACTACCCG GCCCCGGTCG AAGCGATCAA GAGCATCCAG
AAAGCCGCCA ACTTCGGTCG CGACAAGGCC CTGGAAGTCG AAGCCGCAGG CTTTGCCAAG
CTGGCCAAGA CCTCTGTCGC CGAGAGCCTG ATCGGCTTGT TCCTCAACGA TCAGGAACTC
AAGCGCAAGG CCAAGGCGCA TGACGAGATC GCCCACGACG TGAAGCAGGC CGCCGTGCTC
GGCGCCGGCA TCATGGGCGG CGGTATCGCC TACCAGTCGG CGGTCAAAGG TACGCCGATC
CTGATGAAGG ACATCCGCGA GGAAGCCATT CAGCTGGGTC TGAACGAGGC CTCCAAGTTG
CTTGGCAACC GCGTCGAGAA GGGCCGCCTG ACCCCGGCCA AGATGGCCGA GGCCCTCAAC
GCCATTCGCC CGACCCTGTC CTATGGCGAT TTCGCCAATG TCGACATCGT CGTCGAGGCT
GTGGTCGAGA ACCCGAAGGT CAAGCAAGCG GTACTGGCGG AAGTGGAAGG CCAGGTGAAG
GACGATGCGA TCCTCGCTTC CAACACCTCT ACCATCTCCA TCAACCTGCT GGCCAAGGCG
CTCAAGCGCC CGGAAAACTT CGTCGGCATG CACTTCTTCA ACCCGGTGCA CATGATGCCG
CTGGTTGAAG TGATCCGTGG CGAGAAGTCC AGTGACGTGG CGGTCGCCAC CACCGTGGCC
TACGCCAAGA AAATGGGCAA GAACCCGATC GTGGTCAACG ACTGCCCGGG CTTTTTGGTC
AACCGCGTGC TGTTCCCGTA CTTTGGCGGT TTTGCCAAGC TGGTCAGCGC CGGTGTCGAC
TTCGTGCGCA TCGACAAGGT CATGGAGAAG TTCGGCTGGC CGATGGGCCC AGCCTACTTG
ATGGACGTGG TCGGCATCGA CACCGGCCAC CACGGCCGTG ACGTCATGGC CGAAGGCTTC
CCGGATCGCA TGAAGGACGA GCGCCGCTCG GCAGTCGACG CGTTGTACGA GGCCAACCGC
CTGGGCCAGA AGAACGGTAA GGGCTTCTAC GCCTACGAAA CCGACAAGCG CGGCAAGCCG
AAGAAGGTCT TCGATGCCAC CGTGCTCGAC GTGCTCAAAC CGATCGTGTT CGAGCAGCGT
GAAGTCACTG ACGAAGACAT CATCAACTGG ATGATGGTCC CGCTGTGCCT TGAGACCGTG
CGTTGCCTGG AAGACGGCAT CGTCGAAACC GCTGCCGAAG CCGACATGGG CCTGGTCTAC
GGCATTGGTT TCCCTCCCTT CCGCGGTGGT GCGCTGCGTT ACATCGACTC GATCGGTGTG
GCCGAATTCG TCGCCCTGGC CGATCAGTAT GCCGACCTGG GGCCGCTGTA CCACCCGACC
GCCAAGCTGC GTGAAATGGC CAAGAACGGC CAGCGCTTCT TCAACTGA
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| Protein sequence | MIYEGKAITV KALESGIVEL KFDLKGESVN KFNRLTLNEL RQAVDAIRAD ASVKGVIVRS
GKDVFIVGAD ITEFVDNFKL PEAELVAGNL EANRIFNAFE DLEVPTVAAI NGIALGGGLE
MCLAADYRVM STSARIGLPE VKLGIYPGFG GTVRLPRLIG SDNAIEWIAA GKENRAEDAL
KVGAVDAVVA PELLLAGALD LIKRAISGEL DYKAKRQPKL EKLKLNAIEQ MMAFETAKGF
VAGQAGPNYP APVEAIKSIQ KAANFGRDKA LEVEAAGFAK LAKTSVAESL IGLFLNDQEL
KRKAKAHDEI AHDVKQAAVL GAGIMGGGIA YQSAVKGTPI LMKDIREEAI QLGLNEASKL
LGNRVEKGRL TPAKMAEALN AIRPTLSYGD FANVDIVVEA VVENPKVKQA VLAEVEGQVK
DDAILASNTS TISINLLAKA LKRPENFVGM HFFNPVHMMP LVEVIRGEKS SDVAVATTVA
YAKKMGKNPI VVNDCPGFLV NRVLFPYFGG FAKLVSAGVD FVRIDKVMEK FGWPMGPAYL
MDVVGIDTGH HGRDVMAEGF PDRMKDERRS AVDALYEANR LGQKNGKGFY AYETDKRGKP
KKVFDATVLD VLKPIVFEQR EVTDEDIINW MMVPLCLETV RCLEDGIVET AAEADMGLVY
GIGFPPFRGG ALRYIDSIGV AEFVALADQY ADLGPLYHPT AKLREMAKNG QRFFN
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