Gene PP_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2106 
Symbol 
ID1044958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2403371 
End bp2404579 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content64% 
IMG OID637145520 
ProductRh family protein/ammonium transporter 
Protein accessionNP_744256 
Protein GI26988831 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0655034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TGCACAGCGC TATGGACTCT CTGGTCCACG GTTCCAACAC CCTGTTCATT 
CTCATGGGCG CCATTCTGGT GCTGGCCATG CATGCCGGCT TCGCGTTCCT TGAAGTGGGC
ACGGTGCGCC ACAAGAACCA GGTCAACGCC TTGTCGAAGA TCCTCAGCGA CTTCGCCATC
TCGGCGCTGG TCTACTTCTT TATAGGCTAC TGGATCGCCT ATGGGGTCAA CTTCTTCCAG
CCGGCGACAA CGCTGGCTGT CGACCATGGC TATGCGCTGG TCAAGTGTTT CTTCCTGCTG
ACCTTCGCGG CGGCGATTCC GGCGATCATC TCCGGGGGCA TTGCCGAGCG GGCGCGGTTC
GTGCCGCAGT TGTGCGCTAC GGCGTTGATC GTGGCGTTCG TCTATCCGTT CTTCGAGGGT
GTGGTGTGGA ACGGTAATCT GGGCCTACAG GCTTGGCTGC AGGCACGCTT CGGCGCACCG
TTCCACGACT TTGCCGGGTC TGTGGTGGTA CACGCCATGG GGGGCTGGCT GGCGCTGGCG
GCGGTGCTGT TGCTGGGCGC GCGCCGTGGG CGGTACCGCG ATGGGCGTTT GGTGGCTTTT
GCGCCATCGA GCATTCCCTT TCTGGCGCTG GGCTCGTGGA TCCTCATCAT CGGCTGGTTC
GGCTTCAACG TCATGAGTGC CCAGACCTTG CAGGGCGTCA GCGGCCTGGT GGCGATCAAC
TCGTTGATGG CCATGGTGGG TGGCACCCTG TCAGCGTTGC TGGCCGGGCG CAACGACCCG
GGCTTTCTGC ATAACGGCCC GCTGGCCGGG CTGGTGGCGA TTTGCGCAGG TTCCGATCTG
ATGCACCCGG TGGGTGCGCT CGCCACCGGC CTGGTGGCGG GGGCGCTGTT TGTCTGGACC
TTCACCGCCG CGCAAAATCG CTGGAAAATC GACGACGTCC TGGGCGTATG GCCGTTGCAT
GGTCTGTGTG GCGTGTGGGG TGGCATCGCC TGTGGCGTGT TCGGCCAGGT GGCGTTGGGT
GGCATGGGCG GTGTCAGCCT GGTCAGCCAG TTGCTGGGCA GCCTGATGGG CGTGCTGGTG
GCCTTGGCCG GTGGATTTGC CGTGTACGGA GCCATTCGTG CGCTGCATGG CCTGCGCTTG
AGCCATGAGC AGGAGTTCCA GGGCGCGGAC CTGTCGCTGC ACCGGATCGG TGCTACCAGC
CAGGATTGA
 
Protein sequence
MENMHSAMDS LVHGSNTLFI LMGAILVLAM HAGFAFLEVG TVRHKNQVNA LSKILSDFAI 
SALVYFFIGY WIAYGVNFFQ PATTLAVDHG YALVKCFFLL TFAAAIPAII SGGIAERARF
VPQLCATALI VAFVYPFFEG VVWNGNLGLQ AWLQARFGAP FHDFAGSVVV HAMGGWLALA
AVLLLGARRG RYRDGRLVAF APSSIPFLAL GSWILIIGWF GFNVMSAQTL QGVSGLVAIN
SLMAMVGGTL SALLAGRNDP GFLHNGPLAG LVAICAGSDL MHPVGALATG LVAGALFVWT
FTAAQNRWKI DDVLGVWPLH GLCGVWGGIA CGVFGQVALG GMGGVSLVSQ LLGSLMGVLV
ALAGGFAVYG AIRALHGLRL SHEQEFQGAD LSLHRIGATS QD