Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2106 |
Symbol | |
ID | 1044958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2403371 |
End bp | 2404579 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145520 |
Product | Rh family protein/ammonium transporter |
Protein accession | NP_744256 |
Protein GI | 26988831 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0655034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA TGCACAGCGC TATGGACTCT CTGGTCCACG GTTCCAACAC CCTGTTCATT CTCATGGGCG CCATTCTGGT GCTGGCCATG CATGCCGGCT TCGCGTTCCT TGAAGTGGGC ACGGTGCGCC ACAAGAACCA GGTCAACGCC TTGTCGAAGA TCCTCAGCGA CTTCGCCATC TCGGCGCTGG TCTACTTCTT TATAGGCTAC TGGATCGCCT ATGGGGTCAA CTTCTTCCAG CCGGCGACAA CGCTGGCTGT CGACCATGGC TATGCGCTGG TCAAGTGTTT CTTCCTGCTG ACCTTCGCGG CGGCGATTCC GGCGATCATC TCCGGGGGCA TTGCCGAGCG GGCGCGGTTC GTGCCGCAGT TGTGCGCTAC GGCGTTGATC GTGGCGTTCG TCTATCCGTT CTTCGAGGGT GTGGTGTGGA ACGGTAATCT GGGCCTACAG GCTTGGCTGC AGGCACGCTT CGGCGCACCG TTCCACGACT TTGCCGGGTC TGTGGTGGTA CACGCCATGG GGGGCTGGCT GGCGCTGGCG GCGGTGCTGT TGCTGGGCGC GCGCCGTGGG CGGTACCGCG ATGGGCGTTT GGTGGCTTTT GCGCCATCGA GCATTCCCTT TCTGGCGCTG GGCTCGTGGA TCCTCATCAT CGGCTGGTTC GGCTTCAACG TCATGAGTGC CCAGACCTTG CAGGGCGTCA GCGGCCTGGT GGCGATCAAC TCGTTGATGG CCATGGTGGG TGGCACCCTG TCAGCGTTGC TGGCCGGGCG CAACGACCCG GGCTTTCTGC ATAACGGCCC GCTGGCCGGG CTGGTGGCGA TTTGCGCAGG TTCCGATCTG ATGCACCCGG TGGGTGCGCT CGCCACCGGC CTGGTGGCGG GGGCGCTGTT TGTCTGGACC TTCACCGCCG CGCAAAATCG CTGGAAAATC GACGACGTCC TGGGCGTATG GCCGTTGCAT GGTCTGTGTG GCGTGTGGGG TGGCATCGCC TGTGGCGTGT TCGGCCAGGT GGCGTTGGGT GGCATGGGCG GTGTCAGCCT GGTCAGCCAG TTGCTGGGCA GCCTGATGGG CGTGCTGGTG GCCTTGGCCG GTGGATTTGC CGTGTACGGA GCCATTCGTG CGCTGCATGG CCTGCGCTTG AGCCATGAGC AGGAGTTCCA GGGCGCGGAC CTGTCGCTGC ACCGGATCGG TGCTACCAGC CAGGATTGA
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Protein sequence | MENMHSAMDS LVHGSNTLFI LMGAILVLAM HAGFAFLEVG TVRHKNQVNA LSKILSDFAI SALVYFFIGY WIAYGVNFFQ PATTLAVDHG YALVKCFFLL TFAAAIPAII SGGIAERARF VPQLCATALI VAFVYPFFEG VVWNGNLGLQ AWLQARFGAP FHDFAGSVVV HAMGGWLALA AVLLLGARRG RYRDGRLVAF APSSIPFLAL GSWILIIGWF GFNVMSAQTL QGVSGLVAIN SLMAMVGGTL SALLAGRNDP GFLHNGPLAG LVAICAGSDL MHPVGALATG LVAGALFVWT FTAAQNRWKI DDVLGVWPLH GLCGVWGGIA CGVFGQVALG GMGGVSLVSQ LLGSLMGVLV ALAGGFAVYG AIRALHGLRL SHEQEFQGAD LSLHRIGATS QD
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