Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2096 |
Symbol | rlmL |
ID | 1044948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2389182 |
End bp | 2391374 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145510 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | NP_744246 |
Protein GI | 228994958 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.110427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACC GTTTCGAACT TTACCTCACC TGTCCCAAAG GCCTTGAAAG CCTGCTCGCC GAAGAGGCCA AGGGCCTCGG CCTTGACGAG GTGCGCGAGC ACACCTCGGC CATTCGCGGC GCCGCCGACA TGGAAACTGC TTACCGCCTG TGTGTCTGGT CACGTCTGGC CAACCGCGTA TTGCTGGTGC TCAAGCGCTT CTCGATGAAG AACGCCGACG ACCTTTACGA CGGTGTGCAC GCGGTCGACT GGGCCGACCA CCTGGCAGCC GACGGCACCC TGGCGGTGGA GTTCAGCGGC CATGGCTCTG GCATCGACAA TACCCACTTC GGTGCGCTGA AGGTCAAGGA TGCGATCGTC GACAAGCTGC GTAACCGCGA AGGCCTGCGC CCGTCCGTGG AAAAGATCGA CCCTGACGTG CGTGTGCATC TGCGCCTGGA CCGCGGCGAG GCCATTCTGT CCCTCGACCT GTCTGGGCAC AGCCTGCACC AGCGTGGCTA CCGCCTGCAG CAAGGCGCCG CGCCGCTGAA GGAAAACCTG GCGGCAGCGG TGCTGATCCG TGCTGGCTGG CCGCGTATTG CTGCCGAAGG TGGTGCGCTG GCCGACCCGA TGTGCGGCGT GGGTACCTTC CTGGTCGAGG CCGCGATGAT CGCCGCCGAT ATCGCCCCCA ACCTCAAGCG CGAACGCTGG GGCTTCAGTG CTTGGCTCGG CCATGTGCCG GCGCTGTGGC GCAAGGTGCA TGACGAAGCG CAGGCGCGCG CGCAGGCCGG CCTGGCCAAG CCACCGCTGT GGATCCGTGG CTATGAGGCT GACCCACGGC TGATCCAGCC GGGCCGCAAC AACGTCGAGC GTGCCGGCCT GGGCGACTGG GTGAAGATCT ACCAGGGCGA AGTGAGCACC TTCGAGCCAC GCCCGGACCA GAACCAGAAA GGCCTGGTCA TCAGCAACCC GCCCTACGGT GAGCGTCTGG GTGACGAAGC CAGCCTGCTG TACCTCTACC AGAATCTGGG TGAGCGCCTG CGCCAGGCCT GCATGGGCTG GGAAGCAGCG GTATTCACCG GTGCGCCGCA ACTGGGCAAG CGCATGGGTA TTCGTAGCCA TAAGCAGTAC GCGTTCTGGA ACGGCGCATT GCCGTGCAAG CTGCTGCTGT TCAAGGTGCA GCCGGACCAG TTCGTCACCG GTGAACGCCG CGAAGCGCAA CCTGAAGGCA CCGAAGCCCG ACAGCAGGTG CCGCAGGCCA GCGAGCCCGC GCGGCTCTCG GAAGGGGCGC AGATGTTTGC CAACCGCCTG CAGAAGAACC TCAAGCAACT GGGCAAGTGG GCCCGTCGCG AGCAGATCGA CTGCTACCGG CTGTACGATG CCGACATGCC CGAATATGCC CTCGCGGTCG ACCTGTATCA GGACTGGGTA CACGTGCAGG AATACGCCGC GCCACGTTCG GTCGACCCGG ACAAGGCTCA GGCCCGTCTG CTCGACGCAC TGGCTGCCAT CCCGCAGGCG CTGGGCATTT CGCCGCAGCG TGTAGTGCTC AAGCGTCGCG AGCGGCAAAG CGGCACGCGC CAGTACGAAC GTCAGGCTAC CGAGGGCCGT TTCCAGGAAG TGAACGAAGG TGGCGTCAAG CTGCTGGTCA ACCTCACCGA CTACCTGGAT ACCGGGCTGT TCCTCGACCA CCGCCCGATG CGTATGCGCA TCCAGCGCGA GGCTGCCGGC AAGCGCTTCC TCAACCTGTT CTGCTACACC GCCACGGCCA CCGTGCACGC GGCCAAGGGC GGTGCGCGCA GCACCACCAG CGTCGACCTG TCGAAAACCT ACCTGGACTG GGCACGGCGT AACCTGGCGC TCAATGGCTA TTCCGAGCGC AACCGCCTGG AGCAGAGCGA TGTAATGACC TGGCTGGAAG GCAACCGTGA CAGCTACGAC CTGATCTTCA TCGACCCGCC AACCTTCTCC AACTCCAAGC GTATGGAAGG CGTATTCGAC GTGCAGCGTG ACCATGTGCA GCTGTTGGAC CTGGCCATGG CCCGTCTGGC GCCGGGGGGC GTGCTGTATT TCTCCAACAA CTTCCGCAAG TTCCAGCTGG ACGAGCACCT GATGGCGCGT TACGTGGTGG AAGAAATCAG CGCCCAGACC CTGGATCCGG ACTTCGCCCG TAACAACCGT ATCCACCGCG CCTGGCGTTT GCAGCTTCGT TGA
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Protein sequence | MSDRFELYLT CPKGLESLLA EEAKGLGLDE VREHTSAIRG AADMETAYRL CVWSRLANRV LLVLKRFSMK NADDLYDGVH AVDWADHLAA DGTLAVEFSG HGSGIDNTHF GALKVKDAIV DKLRNREGLR PSVEKIDPDV RVHLRLDRGE AILSLDLSGH SLHQRGYRLQ QGAAPLKENL AAAVLIRAGW PRIAAEGGAL ADPMCGVGTF LVEAAMIAAD IAPNLKRERW GFSAWLGHVP ALWRKVHDEA QARAQAGLAK PPLWIRGYEA DPRLIQPGRN NVERAGLGDW VKIYQGEVST FEPRPDQNQK GLVISNPPYG ERLGDEASLL YLYQNLGERL RQACMGWEAA VFTGAPQLGK RMGIRSHKQY AFWNGALPCK LLLFKVQPDQ FVTGERREAQ PEGTEARQQV PQASEPARLS EGAQMFANRL QKNLKQLGKW ARREQIDCYR LYDADMPEYA LAVDLYQDWV HVQEYAAPRS VDPDKAQARL LDALAAIPQA LGISPQRVVL KRRERQSGTR QYERQATEGR FQEVNEGGVK LLVNLTDYLD TGLFLDHRPM RMRIQREAAG KRFLNLFCYT ATATVHAAKG GARSTTSVDL SKTYLDWARR NLALNGYSER NRLEQSDVMT WLEGNRDSYD LIFIDPPTFS NSKRMEGVFD VQRDHVQLLD LAMARLAPGG VLYFSNNFRK FQLDEHLMAR YVVEEISAQT LDPDFARNNR IHRAWRLQLR
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