| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2089 |
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| Symbol | oprF |
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| ID | 1042726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2380334 |
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| End bp | 2381368 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637145503 |
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| Product | OmpF family protein |
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| Protein accession | NP_744239 |
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| Protein GI | 26988814 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.437855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0407434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA AAAACACCTT GGGCTTGGCC ATTGGTTCGC TTGTAGCCGC CACTTCGATT
GGCGCTATGG CACAAGGTCA AGGCGCCGTC GAGACTGAAA TCTTCTACAA GAAAGAATTC
TTCGACAGCC AGCGCGACTT CAAGAACGAC GGCAACCTGT TCGGCGGCTC GATCGGTTAC
TTCCTGACCG ACGACGTTGA GCTGCGTCTG GGCTACGACG AAGTGCACAA CGCTCGTGGC
GAAGACGGCA AGAACATCAA GGGCTCGAAC ACTGCCCTGG ACGCCGTTTA CCACTTCAAC
AACCCGTACG ACGCTATCCG TCCATACGTT TCCGCTGGTT TCTCGCACCA GTCGCTGGGC
CAGACCGGCC GTGGCGGTCG TGACCACTCC ACCTTCGCCA ACGTTGGCGC TGGCGCCAAG
TGGTACATCA CCGACATGTT CTATGCCCGT GCCGGCGTAG AAGCTCAGTA CAACATCGAC
CAGGGCGACA CCGAGTGGGC CCCGAGCGTT GGTGTTGGCC TGAACTTCGG CGGTAGCCCG
AAGCAAGCTG AAGCTGCTCC TGCTCCAGTT GCTGAAGTCT GCTCCGACTC CGACAACGAC
GGCGTGTGCG ACAACGTCGA CAAGTGCCCA GACACCCCGG CCAACGTTAC CGTTGACGCC
GACGGCTGCC CGGCTGTTGC CGAAGTCGTT CGCGTTGAGC TGGACGTCAA GTTCGACTTC
GACAAGTCGG TCGTCAAGCC TAACAGCTAC GGCGACATCA AAAACCTGGC TGACTTCATG
AAGCAGTACC CACAAACCAC CACCGTGGTT GAAGGTCACA CTGACTCCGT GGGTCCAGAC
GCTTACAACC AGAAGCTGTC CGAGCGTCGT GCCAACGCTG TCAAGCAAGT GCTGACCCAG
CAGTACGGCG TAGAATCCAG CCGTGTTGAC TCGGTTGGCT ACGGCGAAAC CCGTCCGGTT
GCTGACAACG CCACCGAAGA AGGCCGTGCT GTCAACCGTC GCGTTGAAGC TCAGGTAGAA
GCCCAGGCCA AGTAA
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| Protein sequence | MKLKNTLGLA IGSLVAATSI GAMAQGQGAV ETEIFYKKEF FDSQRDFKND GNLFGGSIGY
FLTDDVELRL GYDEVHNARG EDGKNIKGSN TALDAVYHFN NPYDAIRPYV SAGFSHQSLG
QTGRGGRDHS TFANVGAGAK WYITDMFYAR AGVEAQYNID QGDTEWAPSV GVGLNFGGSP
KQAEAAPAPV AEVCSDSDND GVCDNVDKCP DTPANVTVDA DGCPAVAEVV RVELDVKFDF
DKSVVKPNSY GDIKNLADFM KQYPQTTTVV EGHTDSVGPD AYNQKLSERR ANAVKQVLTQ
QYGVESSRVD SVGYGETRPV ADNATEEGRA VNRRVEAQVE AQAK
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