Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2050 |
Symbol | |
ID | 1042862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2332617 |
End bp | 2333069 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145464 |
Product | hypothetical protein |
Protein accession | NP_744200 |
Protein GI | 26988775 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00110893 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACC TCCGGCGACG TGAACACTAT CGGCACTACA CGCCCATAAC CACTCGGTGG CACGACAACG ATGTCTATGG CCACGTGAAC AACGTGGTCT ATTACAGCTT TTTCGACAGC GCCGTGAACC GCCTGCTGGT GCGGGAGGGC GGGTTGGATA TCGACCAGGG GAGGGTGATC GCGCTGGTGG TCAGCTCCGC CTGCGACTAC CAGGCGCCGG TGGCCTTCCC GCATGACATC GAAGTGGGCC TTGCGGTGAG CCGGTTGGGC AACACCTCGG TGCACTATCA GTTGGCGGTG TTCCTCTCCG GCCAGCCACT GGCCTGTGCC ACCGGCCGCT TCGTCCATGT ATTCGTCGAC CGCGAAGGGC GGCGTCCGGT GCCGGTGCCT GACTGCCTAC GGCATGTGTT GAGCGAACTG CAGCCCCTAT CCTCTGAGGA ACAGCCATCA TGA
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Protein sequence | MNHLRRREHY RHYTPITTRW HDNDVYGHVN NVVYYSFFDS AVNRLLVREG GLDIDQGRVI ALVVSSACDY QAPVAFPHDI EVGLAVSRLG NTSVHYQLAV FLSGQPLACA TGRFVHVFVD REGRRPVPVP DCLRHVLSEL QPLSSEEQPS
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