Gene PP_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1979 
Symbol 
ID1043051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2242980 
End bp2243861 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID637145390 
Producthydrolase, putative 
Protein accessionNP_744130 
Protein GI26988705 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.708266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0224758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCC TGAGCTGGAT TCGCGGTGTC AATGGCACCT TGGGCCGCCT GGCCCCCGAG 
CATGTCGCGG GCAAGATGCG CCGAGCCTTC ATGACCCCGC GCAACCTGCC GCCGCGGGAT
TGGGAGCTGC CTGTGCTGGC CAGCGCCGAG CGCATTACGC TGCGCTTCGG CCTGTCTGCC
TTGCGCTGGG GTCAAGGGCC GACCGTGCTG CTGATGCACG GTTGGGAAGG GCGCCCGACG
CAGTTTGCCG CCTTGATCGA GACCTTGGTT CAGGCGGGGC ATACGGTGGT GTCGCTGGAA
GGGCCTGGGC ATGGTCGTTC GCCTGGCGAG CAAGCGAATG TGGTGCTGTT TGCCCGGGCG
CTGCTTGAGG CTGCGGCTGA GTTGCCGCCC TTGCGTGCAG TCATTGGCCA TTCCATGGGT
GGGGCAAGCG TGCTGCTGGC TTTGCAGATG GGGCTGCGCA CAGAGGCGGC TGTCAGCATT
GCAGCGCCGG CGCGGTTGCT CGGTGTGTTG CGTGGTTTTG CCCATCGCCT GGGGCTGCCA
GCACGGGCAC GGGCAGCGTT CATTCGCCAG ATCGAGCGCG ATGTGGGCAT GCAGATTGCG
CGGCTGGATG TCACGGGGTA CCAGCTGGAG CTGCCGGGGC TGGTGGTGCA TGCTGCCGAT
GATGCTCTCG TGCCCGCAGA TGAGGCACAT GTCATCCACA AGTCCTGGTT CGACAGCCGG
CTGATGCTGC TGGAAGAGGG TGGTCACCAG CGAGTGCTGG CCGACCCGCG GCTAAGTGAA
GCCGTGCTCG AATTGCTGGC TCGGGCTGAA GCGGTTAGTG TCGGGGCGGC TTCAGTCGCG
AACATCGGTA TCGCCGCCGG TGCCATCCGC CGCGGTGTCT GA
 
Protein sequence
MTTLSWIRGV NGTLGRLAPE HVAGKMRRAF MTPRNLPPRD WELPVLASAE RITLRFGLSA 
LRWGQGPTVL LMHGWEGRPT QFAALIETLV QAGHTVVSLE GPGHGRSPGE QANVVLFARA
LLEAAAELPP LRAVIGHSMG GASVLLALQM GLRTEAAVSI AAPARLLGVL RGFAHRLGLP
ARARAAFIRQ IERDVGMQIA RLDVTGYQLE LPGLVVHAAD DALVPADEAH VIHKSWFDSR
LMLLEEGGHQ RVLADPRLSE AVLELLARAE AVSVGAASVA NIGIAAGAIR RGV