| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1976 |
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| Symbol | |
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| ID | 1043057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2238570 |
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| End bp | 2239733 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637145381 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | NP_744127 |
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| Protein GI | 26988702 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.339437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00926098 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGCAG GAGGCGGGCA CCGGGCTCCA GCAATGGCGC GAACGTCACT TGTCGACGGG
CCCTGCGCCG CTGTTAAATT TGTTTACATT TCTGGAACGA TAGTCCCCAT GCCTGCCCAA
CTCAAACGCC GCCTGACGCT CTTCTTCGCC CTGGTGGCCA TCATCGCCCT CGCCTTCCTG
GGCCACTGGT ACTTCAAGGG CCGCTTCTAC GAGAGCACCG ACAACGCTTA CGTGCAGGGT
GAGATCACCC GTATCTCCAG CCAGCTTGGC GCACGTATCG AAACGGTGCC GGTCGAGGAC
AACCAGCACG TCAGCAAGGG CGACCTGCTG GTGCGCCTGG AAGCCGCCGA CTTTGAGCTG
GCGGTCGAAC GCGCCCGTGC CGCCCTGGCC ACCCGCGAAG CCGAGTACGC ACAAGCGCAA
AGCCGCCTCA CCCAACAAGG CAGCCTGATT GCTGCCGGCC AGGCCCAGTT GGCGGCGACC
CAGGCCACGT TCGACCGTTC ACGGCTGGAC CTGAGCCGTG CCGAGAAGCT GCGCAAGCCG
GGTTTTGTCT CTGAAGAGCG GGTCACTACC CTGTCGGCGG ACAGCCATGT CGCCGGCTCC
CAGGTCGACA AGGCCCGCGC CGACCTGCAA AGCCAGCGCC AGCAGGTCAC CGCCCTGAAC
GCCGAACTCA AGCGCCTCGA TGCGCAAATC GCCAATGCCC GCACCGACCT GGCCCAGGCC
GAACTGAACC TGACCCGCTG CGAAATCCAT GCCCCGATCA GCGGCACCAT CGGCCAGCGC
AATGCGCGCA ATGGCCAGGT GGTGCAGGCC GGCGCCTACC TGCTGTCGAT CGTGCCGGAT
GAAGACATCT GGGTGCAGGC CAACTTCAAG GAAACCCAGA TCGGCCGCAT GCACCCCGGC
CAGCGCGCGG AACTGTTGTT CGACAGCTAC CCCGACACAC CGATCGAAGG CCGGGTGGAC
AGCCTGTTCG CCGCGTCCGG TGCGCAGTTC AGCCTGCTGC CACCGGACAA CGCCACCGGC
AACTTCACCA AAGTTGTGCA GCGCATCCCG ATAAAACTCA CGTTCCACGC CGACAACCCA
TTGCATGGGC GTATTCGCCC CGGCATGTCG GTGACCGCCA CCGTCGACCT GCGCAGCGAA
GACGAAGGCC ACAATGGCCG GTGA
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| Protein sequence | MLAGGGHRAP AMARTSLVDG PCAAVKFVYI SGTIVPMPAQ LKRRLTLFFA LVAIIALAFL
GHWYFKGRFY ESTDNAYVQG EITRISSQLG ARIETVPVED NQHVSKGDLL VRLEAADFEL
AVERARAALA TREAEYAQAQ SRLTQQGSLI AAGQAQLAAT QATFDRSRLD LSRAEKLRKP
GFVSEERVTT LSADSHVAGS QVDKARADLQ SQRQQVTALN AELKRLDAQI ANARTDLAQA
ELNLTRCEIH APISGTIGQR NARNGQVVQA GAYLLSIVPD EDIWVQANFK ETQIGRMHPG
QRAELLFDSY PDTPIEGRVD SLFAASGAQF SLLPPDNATG NFTKVVQRIP IKLTFHADNP
LHGRIRPGMS VTATVDLRSE DEGHNGR
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