| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1975 |
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| Symbol | |
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| ID | 1043059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2237030 |
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| End bp | 2238580 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145380 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | NP_744126 |
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| Protein GI | 26988701 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.211725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00374336 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGGTG ACCAGCTGCT GCGCCCCACA GCGGAGCCAA CCCGACGCGA CTGGATCGCG
GTGATGAGCG TGATGCTCGG TGCCTTCATG GCAGTGCTGG ATATCCAGAT CACCAACTCC
TCGCTGAAGG ACATCCAGGG CGCTCTGTCG GCGACCCTGG AAGAAGGCTC ATGGATTTCA
ACCTCCTACC TGGTGGCGGA AATCATCATG ATCCCGCTGA CGGCCTGGCT GGTGCAGCTG
TTGTCGGCGC GGCGCCTGGC GGTGTGGGTA TCCGGCGGTT TCCTGCTGTC GTCGCTGCTG
TGCTCGATGG CCTGGAACCT GGAGAGCATG ATCCTGTTCC GTGCCTTGCA GGGTTTCACC
GGTGGCGCGC TGATCCCGCT GGCCTTCACC CTGACGCTGA TCAAGCTGCC CGAGCACCAC
CGCGCCAAAG GCATGGCGAT GTTCGCCATG ACCGCCACTT TTGCCCCCTC CATCGGACCC
ACCCTGGGCG GCTGGCTGAC CGAGAACTGG GGCTGGGAAT ACATCTTCTA CATCAATATC
CCACCGGGCC TGCTAATGAT CGCCGGCTTG TTATACGGGC TTGAGAAGAA GGAGGCGCAC
TGGGAGCTGC TGAAAAGTAC CGATTATGCC GGCATCGTCA CGCTCGGCCT TGGGTTGGGC
TGCCTGCAGG TGTTTCTCGA GGAAGGCCAT CGCAAGGACT GGCTGGAGTC GCACCTGATC
GTCGGCCTGG GCAGCGTTGC ACTGGTCAGC CTGATCACCT TCGTCATCCT GCAGTTTTCC
AAGCCTCACC CGCTGATCAA CCTGCGTATC CTCGGCAACC GCAACTTTGG CCTGTCGAGC
ATCGCCAGCC TGGGCATGGG TGTGGGCCTG TACGGCTCGA TCTATCTGCT ACCGCTGTAC
CTGGCGCAGG TACAGGGTTA CAACGCCTTG CAGATTGGCG AGGTGATCAT GTGGATGGGT
ATTCCGCAGC TGTTCCTGAT CCCGCTGGTG CCGCAACTGA TGAAGGTGAT ATCGCCCAAG
GTACTATGCG CGCTGGGGTT TTGCCTGTTC GGCGCTGCCA GTTTCGGTTC GGGGGTGCTC
AACCCGGACT TTGCCGGGCC GCAGTTCAAC CATATCCAGA TCATCCGCGC CCTGGGCCAG
CCGATGATCA TGGTGACCAT CTCGCTGATT GCCACCGCGT ATATCCAACA ACAGGATGCC
GGGTCCGCGT CGAGCCTGTT CAATATTCTG CGTAACCTGG GCGGGGCCAT CGGTATTGCC
TTGCTGGCCA CCCTGCTGGA TGCGCGCACC AAGGTGTACT TCGACTACCT GCGCGAATCG
GTGGTGCCGA GCAACCCACA GGTGGCTGAG CGGCTGGCGC AATTGGCGGA GCGCTTGGGC
AATGACAATG CAGCGCTGGG CAAACTTAGC GAAATTACCC ACCAGCAGGC GCTGATCATG
GCTTACAACG ATGCCTTCCA CTTTGTCGGG ATCGGGTTGG CGGTGAGCAT GGTGGCGGTG
CTGCTGACCC GCAAGTTGCC GGAAGGGTTG AAGGCTGGGG AAGCCCATTG A
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| Protein sequence | MAGDQLLRPT AEPTRRDWIA VMSVMLGAFM AVLDIQITNS SLKDIQGALS ATLEEGSWIS
TSYLVAEIIM IPLTAWLVQL LSARRLAVWV SGGFLLSSLL CSMAWNLESM ILFRALQGFT
GGALIPLAFT LTLIKLPEHH RAKGMAMFAM TATFAPSIGP TLGGWLTENW GWEYIFYINI
PPGLLMIAGL LYGLEKKEAH WELLKSTDYA GIVTLGLGLG CLQVFLEEGH RKDWLESHLI
VGLGSVALVS LITFVILQFS KPHPLINLRI LGNRNFGLSS IASLGMGVGL YGSIYLLPLY
LAQVQGYNAL QIGEVIMWMG IPQLFLIPLV PQLMKVISPK VLCALGFCLF GAASFGSGVL
NPDFAGPQFN HIQIIRALGQ PMIMVTISLI ATAYIQQQDA GSASSLFNIL RNLGGAIGIA
LLATLLDART KVYFDYLRES VVPSNPQVAE RLAQLAERLG NDNAALGKLS EITHQQALIM
AYNDAFHFVG IGLAVSMVAV LLTRKLPEGL KAGEAH
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