| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1966 |
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| Symbol | holB |
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| ID | 1043069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2227845 |
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| End bp | 2228831 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637145370 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | NP_744117 |
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| Protein GI | 26988692 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.63902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000046762 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTGAGG CCTACCCTTG GCAGCAGGCG CTGTGGCAGC AACTGGCCGG TCGCAGCCGC
CACGCCCACG CTTACCTGCT GCATGGGCCG CAGGGTATTG GCAAGCGAGC CATGGCCGAG
CGTCTGATGG CGCGCCTGTT GTGCCAGCAG CCGCAGGGCC TGGACGCTTG TGGGGCGTGT
AAGTCGTGCC TGTTGCTCAA GGCCGGCAGC CACCCGGACA ACTTCGTCCT CGAGCCGGAG
GAGGCTGACA AGCCGATCAA GGTCGACCAG GTACGCGAGC TGGTGGCCTT TGTGGTGCAG
ACCGCGCAGT TAGGCGGGCG CAAGGTGGTG TTGATCGAGC CGGTGGAGGC GATGAATGTC
AACGCCTCCA ACGCCCTGCT CAAAAGCCTT GAAGAACCTT CCGGTGATAC CGTGTTGTTG
CTGGTGACGC ACCAGCCCAG CCGTCTGTTG CCGACGATCA AGAGCCGCTG CCAGCAGGTG
GCCTGTCCGC AGCCCAGTCT GGCCCAGAGC CAGGCATGGC TGGCTGGCGC GTTACCCGAC
TGCGACGAGG TCGAGCGCGA TGAGCTGCTG ACGCTGGCGG CAGGTTCGCC ATTGATGGCG
GTCAGCCTGC AGGCGCAGGG GGTTCGCGAG CAACGCGCGC TGGTAACCGA CGGGGTGAAG
AAGCTGCTCA AGCAGCAGCA ATCGCCCAGC CAGCTGGCCG ATGCCTGGAG CGGTGTGCCG
TTGTTGCTGC TGTTCGACTG GTTCTGCGAT TGGACGCACC TGATCCTGCG CTACCAGTTG
ACCCAGGACG AAGAAGGGTT AGGCTTGGCC GATATGCGCA AGGTCGTGCA ATACCTGGCG
CAGAAGAGCC GCCAGGCCAA GGTGCTGGAG GTGCAGGCAT GGATCCTCGA ACAGCGCCAG
AAGGTACTGG GCAAGGCCAA CCTCAACCGC GCCTTGTTGC TTGAATCGCT GCTGGCTCAC
TGGCTGCAAC TGCCGGGTGC CCGCTGA
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| Protein sequence | MAEAYPWQQA LWQQLAGRSR HAHAYLLHGP QGIGKRAMAE RLMARLLCQQ PQGLDACGAC
KSCLLLKAGS HPDNFVLEPE EADKPIKVDQ VRELVAFVVQ TAQLGGRKVV LIEPVEAMNV
NASNALLKSL EEPSGDTVLL LVTHQPSRLL PTIKSRCQQV ACPQPSLAQS QAWLAGALPD
CDEVERDELL TLAAGSPLMA VSLQAQGVRE QRALVTDGVK KLLKQQQSPS QLADAWSGVP
LLLLFDWFCD WTHLILRYQL TQDEEGLGLA DMRKVVQYLA QKSRQAKVLE VQAWILEQRQ
KVLGKANLNR ALLLESLLAH WLQLPGAR
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