| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1918 |
|---|
| Symbol | |
|---|
| ID | 1043156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2161050 |
|---|
| End bp | 2162315 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637145325 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | NP_744072 |
|---|
| Protein GI | 26988647 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.204138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000331509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTGCCCGTAC GTTACTGGAA ACCTGAATTC GTGAGACGTA AATTCCTGCT GTTGCTGGAA
ATGGGCTTGA TCCTTGCCGG CCTGGCGTTT GGCTGGTCGG CCTGGAAGGT CAACTCGGTC
CTGGAGCAGC CCCTGCACAT CACGCAGGAA CGCCTGCTGG ATGTGCCCAA TGGCACTAAC
CCCAACCGCA TGTTCTACAG CATGCAAAGG GAAGGGTTGC TCGACGACGC TGTCTGGTTG
CGTTTGTACT GGCGCTTCAA CATGGCCGGC ACCCCCCTGC ACACCGGCGA GTACCGTCTT
ACCCCTGGCA TGACCGTCGA GCAATTGTTC GACGCCTGGC GCCGTGCCGA CGTGGTGCAG
TACAACCTCA CCCTGGTCGA AGGCTGGACC TTCCGCCAGG TGCGTGCGGC CGTGGCCAAG
CATGAAAAGA TCAAGCATAC CCTGGAGGGC TTGTCGGATG CCGAGGTCAT GGACAAGCTC
GGCCATACCG GTGTGTTCCC CGAAGGCCGC TTCTTCCCCG ACACCTACCG CTTCGTGCGG
GGTATGAGCG ATGTCGAGTT GCTGCAGCAG GCCTACATGC GTCTGGACGA GGTGCTGGCC
AAGGAGTGGG CCGAGCGTTC CACCGACCTG CCGTATCGTG ACCCGTACCA GGCGCTGATC
ATGGCCTCCC TGGTAGAAAA GGAAACCGGC ATTCCGCAGG AGCGCGGGCA GATCGCCGGC
GTGTTCGTGC GGCGCATGCG CCTGGGTATG ATGCTGCAGA CCGACCCGAC GGTTATCTAT
GGCATGGGTG AGCGCTACAA CGGCAGGATC ACCCGCGCGG ACCTGCGCGA GCCTACGCCT
TACAACACCT ACACCATGAC CGGCCTGCCG CCGACCCCGA TCGCCATGGT CGGCCGCGAG
GCGATTCACG CGGCGCTGAA CCCGTCCAAT GGCACCAGTC TTTACTTCGT CGCCCGCGGC
GATGGCAGCC ATGTGTTTTC CGACGACCTC GACGACCACA ATTCGGCAGT GCGCGAGTTC
CAGCTCAAGC GCCGGTCGGA CTACCGCTCC AGCCCCGCGC CGCAGCAAGA GGCCAAGCCA
GGTGCCGATG ATGCCGAACA GGCATCGGGC GCCGACGATG CGCAGCGCCC TGAGCCCCCA
GCAGCGGACC CGTCAGCAAC GGATGAGCCA ACTGCGCAGC CAGCCCCCGA TGAAGCGCCC
GCGCAGGATG CCCCTGCCGG CGGTGCACAA GCGGCCGAGC GGCCGACGCC TGACGAACAA
CATTAA
|
|---|
| Protein sequence | MPVRYWKPEF VRRKFLLLLE MGLILAGLAF GWSAWKVNSV LEQPLHITQE RLLDVPNGTN
PNRMFYSMQR EGLLDDAVWL RLYWRFNMAG TPLHTGEYRL TPGMTVEQLF DAWRRADVVQ
YNLTLVEGWT FRQVRAAVAK HEKIKHTLEG LSDAEVMDKL GHTGVFPEGR FFPDTYRFVR
GMSDVELLQQ AYMRLDEVLA KEWAERSTDL PYRDPYQALI MASLVEKETG IPQERGQIAG
VFVRRMRLGM MLQTDPTVIY GMGERYNGRI TRADLREPTP YNTYTMTGLP PTPIAMVGRE
AIHAALNPSN GTSLYFVARG DGSHVFSDDL DDHNSAVREF QLKRRSDYRS SPAPQQEAKP
GADDAEQASG ADDAQRPEPP AADPSATDEP TAQPAPDEAP AQDAPAGGAQ AAERPTPDEQ
H
|
|---|
| |