| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1902 |
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| Symbol | kdsB |
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| ID | 1043180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2144880 |
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| End bp | 2145644 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637145310 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | NP_744057 |
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| Protein GI | 26988632 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000381885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGCCTGG AATTTACGGT AGTAATCCCC GCCCGGCTGC GCTCCACCCG CCTGCCAGGC
AAACCGCTGC TGCTGATTGC CGGCAAGCCG ATGGTGCAAC ATGTGTGGGA GCAGGCCCGC
AAGAGCGGTG CCAGCCGTGT GGTCATCGCC ACCGACGACA CCAGCATCCT CGAAGCCTGC
CAGGCCTTCG GTGCTGAAGT GATGATGACC CGTGCCGATC ATGAATCGGG CACTGACCGC
CTGGCCGAAG TGGCCGCGTA CCTAGGGTTG CCGGCTGACG CCATTGTGGT CAACGTGCAG
GGCGACGAGC CGCTGATCCC GCCGGTGATC ATCGACCAGG TGGCGGCCAA CCTGGCTGCG
CATCCGGAAG CCGGTATCGC CACCCTGGCC GAGCCGATCC ATGAGCCGGA AACCGTGTTC
AACCCGAACG CGGTCAAGGT GGTGAGTGAC AAGAACGGCC TGGCCCTGAC GTTCAGCCGA
GCGCCGCTGC CCTGGGCCCG CGATACCTTT GCCAAGGCCC GCGACGTGCT GCCGGAAGGG
GTGCCCTATC GCCGTCATAT TGGCATGTAC GCCTACCGTG TCGGCTTCCT GCACGACTTC
GTCAGCTGGG GCCCATGCTG GCTCGAGCAG GCTGAAGCGC TGGAGCAGCT GCGTGCCCTG
TGGCACGGCG TACGCATTCA CATCGAGGAC GCCATCGAGG CGCCTGCCGT GGGTGTCGAC
ACCCCAGAGG ATCTGGAGCG CGTACGGCGC TTGCTGGAGG CCTGA
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| Protein sequence | MSLEFTVVIP ARLRSTRLPG KPLLLIAGKP MVQHVWEQAR KSGASRVVIA TDDTSILEAC
QAFGAEVMMT RADHESGTDR LAEVAAYLGL PADAIVVNVQ GDEPLIPPVI IDQVAANLAA
HPEAGIATLA EPIHEPETVF NPNAVKVVSD KNGLALTFSR APLPWARDTF AKARDVLPEG
VPYRRHIGMY AYRVGFLHDF VSWGPCWLEQ AEALEQLRAL WHGVRIHIED AIEAPAVGVD
TPEDLERVRR LLEA
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