Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1893 |
Symbol | fadE |
ID | 1043191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2134300 |
End bp | 2136747 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145301 |
Product | acyl-CoA dehydrogenase |
Protein accession | NP_744048 |
Protein GI | 26988623 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000141749 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGCTGT TGTGGTTGGT GGTGCTGGTG ATCGGCGCGG CGTACCTCAC GCACCGGCGC CTGGCGCCCT TGCAGATTCT CGGCATCGTG GCGGCCTATG TGCTGTTGAT GGGCATTTTC AGCAGTGCCC CCGGCTGGCT GCTGGCGCTG ATCTGGGTGG TGCTGGCCCT GAAGATCGCC CTGGTTGCGC TCCCGCAGTG GCGACGCAAA CTCTTTACCG CCCCGGTATT CCGCTGGTTC CAGCGCACCC TGCCACCCAT GTCGCAGACC GAGCGCGAAG CCATCGACGC CGGTACCGTG TGGTGGGACG GCGAACTGTT CAGTGGCCGC CCCGACTGGC GCACCTTGCT GGCCTACCCG GCACCGAAAC TGACCGAAGA AGAACAGGCC TTCATCGATG GCCCGACCGA AGCACTGTGC GCCATGGTCA GCGACTGGCA GATTGGCCAG GATCTGGACC TGCCGCCCGA AGCCTGGGCA CATATCAAGC AACATGGCTT TTTCGCCCTG ATCATCCCCA AGGAATACGG CGGCAAGGGC TTCTCCGCCT ACGCCCACTC CCAGGTGGCG ATGAAGCTGG CCACCCGGAG CGGCGACCTG GCCTCCACGG TGATGGTGCC CAACTCCCTG GGCCCTGCCG AACTGCTGCT GCACTACGGC ACCGACGAAC AACGCAACCG CTACCTGCCG CGCCTGGCCC GTGGCGAGGA AATCCCCTGT TTCGCCCTCA CCGGGCCGCT GGCCGGTTCG GACGCTGGCG CCATGCCCGA CACCGGCATC ATCTGCAAAG GCCAGTGGCA AGGCGAAGAA GTGATCGGCC TGCGCCTGAA CTGGGAAAAG CGCTACATCA CCCTCGGCCC GGTCGCCACC CTGCTGGGCC TGGCCTTCAA AGCCTACGAC CCCGACCATC TGTTGGGCGA ACAGGAGGAG CTCGGCATCA GCCTGGCCCT GATCCCCACC GACACGCCCG GCGTCGAGAT CGGCAAACGC CACCTGCCGC TGGGCGCCGC CTTCATGAAC GGCCCCAACA GCGGCAAAGA CGTGTTCGTA CCGCTGGACT TCCTGATCGG TGGCCAGGCC ATGCTCGGCA AGGGCTGGAT GATGTTGATG AACTGCCTGT CGGTGGGCCG CTCCATCTCA CTGCCGGCGG TCGGCACCGG TGCCGCCAAG TACACCAGCC TGGTGACCGG CCAGTACGCC AATATCCGCG AGCAGTTCAA CGTGCCATTG GCGGCCTTCG AAGGCATCCA GGAATCGCTG GCACGCATTG GCGGCAACGC CTGGCTGATG GACAGTGCCC GCCTGCTGAC CGCCAAGGCC GTGGACCTGG GCGAAAAGCC CTCGGTGCTG TCGGCGATCC TCAAGTACCA CCTGACCGAG CGTGGCCGCG AATGCATCCA GCACGCCATG GACGTGCACG GTGGCAAGGG CATCATCATG GGCCCGAACA ACTACCTGGG CCGCAACTGG CAAGGTGCGC CGATCTTCAT CACGGTCGAA GGTGCCAACA TCCTTTCACG CAACCTGATG ATCTTCGGCC AGGGCGCCAT TCGCTGCCAT CCGTTCGTGC TCAAGGAAAT GGCATTGGCC GGGCGTGAAG ACCACGATCA GGCACTCAAG GAATTCGATG ACCTGCTGAT GAAACACATC CTGTTCGCCG CCGGCAATGC GGCCAGTACC TTGGTCTACG GCCTGGGGCT GGGTCGCTTT GAGCGGGTGC CGGGCGATGC CCTGAGCCAA GGCTACTTCC GCGCCCTGAA CCGCCAGGCG GCGGCGTTTG CCATGATGGC CGACCTTTCG ATGATGCTGC TGGGTGGGGC GCTCAAGCGC CGCGAGCGCC TCAGCGCCCG GCTTGGCGAT GTGCTGAGCT ATCTGTACCT CGCCAGCGCT GCCCTGAAGC GCTATCACGA CCAGGGCTCG CCCGAATACC TGCAGCCGCT GCTGCGCTGG GCCATGGAAG AAAGCCTGGG CCAGACGGAG CGTGCGCTGG ACCGCCTGCT CGACAATTTC CCCAACCGCT TCGTCGGCTG CGCGCTGCGG GTACTGGTGT TCCCCTTCGG CCGCCGCCAT AAGGGCCCCG GTGATGAACT GGATGCCGAG GTGGCCGAGC TGATCGGCCG GCGCAAGGGC GATCCGGCAC TGGAGGAACT GCTGGCCGGC TGCTACCGCC CACAGGCAGA ACACGACCCG GTCGCGGATC TGCAACGGGC CAGTGACCTG CTCGAAGACA CGGCACAGTT GAGCAAGGCC CTGTACCAAG CCGTCAAGGA AGGCAAAGTC CAGCCAGCCC CCGGCCAGTC CGGTATCGAC GCCGCCGTCA AGGCAGGCGT GCTGCAACCC GACGATGGCC AGCGGCTGCA CGAGGCCGAA CAGGCTCGGC GCAAGGTGAT CGATGTCGAT GCCTTCGACA AGGCGCAGTT GCTCGCCGTA CCGGGCAAGG TGCGCTGA
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Protein sequence | MLLLWLVVLV IGAAYLTHRR LAPLQILGIV AAYVLLMGIF SSAPGWLLAL IWVVLALKIA LVALPQWRRK LFTAPVFRWF QRTLPPMSQT EREAIDAGTV WWDGELFSGR PDWRTLLAYP APKLTEEEQA FIDGPTEALC AMVSDWQIGQ DLDLPPEAWA HIKQHGFFAL IIPKEYGGKG FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNRYLP RLARGEEIPC FALTGPLAGS DAGAMPDTGI ICKGQWQGEE VIGLRLNWEK RYITLGPVAT LLGLAFKAYD PDHLLGEQEE LGISLALIPT DTPGVEIGKR HLPLGAAFMN GPNSGKDVFV PLDFLIGGQA MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK YTSLVTGQYA NIREQFNVPL AAFEGIQESL ARIGGNAWLM DSARLLTAKA VDLGEKPSVL SAILKYHLTE RGRECIQHAM DVHGGKGIIM GPNNYLGRNW QGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALA GREDHDQALK EFDDLLMKHI LFAAGNAAST LVYGLGLGRF ERVPGDALSQ GYFRALNRQA AAFAMMADLS MMLLGGALKR RERLSARLGD VLSYLYLASA ALKRYHDQGS PEYLQPLLRW AMEESLGQTE RALDRLLDNF PNRFVGCALR VLVFPFGRRH KGPGDELDAE VAELIGRRKG DPALEELLAG CYRPQAEHDP VADLQRASDL LEDTAQLSKA LYQAVKEGKV QPAPGQSGID AAVKAGVLQP DDGQRLHEAE QARRKVIDVD AFDKAQLLAV PGKVR
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