Gene PP_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1873 
Symbol 
ID1043223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2096642 
End bp2097037 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content63% 
IMG OID637145276 
Productmethionine sulfoxide reductase B 
Protein accessionNP_744028 
Protein GI26988603 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0253598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.296694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TTGAAAAAAC CCTGGACGAA TGGCGGTCGA TGCTCGACCC CGAGCAGTAC 
CAGGTATGCC GCCTCAAGGG CACCGAACGG CCATTCAGTG GCAAGTACAA CAGCGAGCGC
CGCGACGGCA TCTACCACTG CATCTGTTGC GGCCTGCCGC TGTTCGATGC GCAGACCAAG
TTCGACGCCG GCTGCGGCTG GCCGAGCTTC TACGCGCCGA TCGAGGACAG CGCGATGATC
GAGATCCGCG ACACATCCCA CGGCATGATC CGCACCGAGG TCACCTGCGC CCGTTGCGAC
GCGCACCTGG GGCATGTGTT CCCTGACGGC CCGCCACCGA CCGGCCTGCG CTACTGCATC
AACTCGGTGT GCATCGACCT TCGTCCGCGC GACTGA
 
Protein sequence
MKKIEKTLDE WRSMLDPEQY QVCRLKGTER PFSGKYNSER RDGIYHCICC GLPLFDAQTK 
FDAGCGWPSF YAPIEDSAMI EIRDTSHGMI RTEVTCARCD AHLGHVFPDG PPPTGLRYCI
NSVCIDLRPR D