Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1858 |
Symbol | efp |
ID | 1043241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2080510 |
End bp | 2081079 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637145261 |
Product | elongation factor P |
Protein accession | NP_744013 |
Protein GI | 26988588 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.453569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG GTAAAGAACT GAAACCCGGT ACCGTCCTGC GGATCGACAA CGACCCGTGG CTGGTTCAAA AAGCTGAGTT CACCAAGTCG GGCCGTAACA GCGCGATCAT GAAGACCAAG CTGAAGAACC TGCTGACCGG CTACAAGACC GAAACCGTAT ACGGTGCGGA CGACAAGCTG GACGACGTGA TCCTGGATCG CAAAGAAGCG ACCCTGTCGT TCATCAATGG TGACGAGTAC ACCTTCATGG ACACCACCGA CTACACCATG TACGAGCTGA ACGCCGAGGA CATCGAAGCC GTTCTGCCGT ACATCGAAGA AGGCATGGAA GACGTCTGCG AAGCCGTGTT CTTCGAAGGC CGTCTGGTGT CGGTTGAGCT GCCGACCACC ATCAGCCGTA AAGTTGTCTA CACCGAGAAC GCTGCTCGCG GTGACACCTC CGGCAAAGTC ATGAAGCCTG CCAAGCTGGC GAACGGTACC GAGATCTCGG TTGCCGACTT CATCCAGATC GACGAGTGGA TCGACATCGA CACTCGCGAC AACAGCTTCA AAGGCCGCTC CAAGAAGTAA
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Protein sequence | MKTGKELKPG TVLRIDNDPW LVQKAEFTKS GRNSAIMKTK LKNLLTGYKT ETVYGADDKL DDVILDRKEA TLSFINGDEY TFMDTTDYTM YELNAEDIEA VLPYIEEGME DVCEAVFFEG RLVSVELPTT ISRKVVYTEN AARGDTSGKV MKPAKLANGT EISVADFIQI DEWIDIDTRD NSFKGRSKK
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