Gene PP_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1857 
Symbol 
ID1043242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2079328 
End bp2080461 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content65% 
IMG OID637145260 
Producthypothetical protein 
Protein accessionNP_744012 
Protein GI26988587 
COG category[S] Function unknown 
COG ID[COG4394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA CCTGGGACAT CTTCTGCAGC GTCGTCGACA ACTACGGCGA TATTGGCGTG 
ACTTGGCGCC TGGCCCGGCA GTTGGTGGCC GAGCACGGCC TGGCGGTGCG CCTGTGGGTG
GATGACCTCA ACGCTTTCAC GCCCATGTGC CCTGGCGCCG ACGCCACGGC GGCGCAACAG
TGGCAACACG GCGTGGATGT GCGCCACTGG CCGGCAGCGT GGTTGCCGGT GGCGCCGGCC
GATGTGGTGA TCGGCGCATT CGCCTGCCAG TTGCCCGCAG CCTATGTCGA GGCCATGCGT
GCCCGCCCGC AGCCGCCGCT CTGGCTCAAC CTCGAGTACC TGAGTGCCGA GGACTGGGTG
GAGGGTTGCC ACGGGTTGCC TTCGCCGCAG CCCAACGGTT TGCGCAAGGT ATTTTTCTTC
CCGGGCTTTA CCGACAAAAC GGGTGGTTTG CTGCGCGAAG GTTCGCTGCT GGCCCGGCGT
GACGGGTTCC AGCAGTCGGC GGAGGCGCGC CGTGCCTTTT TGCAGGGGCT TGGTGTAGAC
CTAGTGCCGG GTGCGCTGCT GATTTCGCTG TTTGCCTATG AAAACCCACA GCTGGGCAAC
TGGCTTGATG CCCTGGCCAC GGCTGACCAG CCTTGCCACC TGTTGGTCCC GCAAGGGCGC
GTCGTCGCGG GGCTCAGCCA GTGGTTGGGC GAGGGGCCGC TGCACGTGGG TGATGTGCGC
ACCCGCGGTG CGCTGACCGT TCAGGTGCTG CCTTTCGTCA GCCAGGACGA CTTCGACCGG
CTGTTATGGA GCTGTGATTT CAATGCCGTG CGTGGCGAAG ACTCGTTCGT GCGTGCGCAG
TGGGCGGGGC AGCCGATGCT GTGGCACATC TATGTGCAGG ACGAGAATGC CCATTGGGAA
AAGCTCGAAG CTTTCCTCGC GCATTATCGC TGCGGCCTGT CAGACGATGC CGATGCAGCC
CTGTTGGGCC TGTGGCGTGC CTGGAACATG GATTTCGACA TGGGCCAGGC CTGGCGGGCG
GCCCGCCAGC ATTGGCCGGA ACTGCAGCAG CATGCTCGCC TTTGGGGGGC GCGACAGGCC
GCTCAGCCGG ACCTTGCCAC AGCGCTAGTA CACTTTTACC GAAATTCGCT ATGA
 
Protein sequence
MKATWDIFCS VVDNYGDIGV TWRLARQLVA EHGLAVRLWV DDLNAFTPMC PGADATAAQQ 
WQHGVDVRHW PAAWLPVAPA DVVIGAFACQ LPAAYVEAMR ARPQPPLWLN LEYLSAEDWV
EGCHGLPSPQ PNGLRKVFFF PGFTDKTGGL LREGSLLARR DGFQQSAEAR RAFLQGLGVD
LVPGALLISL FAYENPQLGN WLDALATADQ PCHLLVPQGR VVAGLSQWLG EGPLHVGDVR
TRGALTVQVL PFVSQDDFDR LLWSCDFNAV RGEDSFVRAQ WAGQPMLWHI YVQDENAHWE
KLEAFLAHYR CGLSDDADAA LLGLWRAWNM DFDMGQAWRA ARQHWPELQQ HARLWGARQA
AQPDLATALV HFYRNSL