Gene PP_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1846 
Symbol 
ID1043255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2069624 
End bp2071045 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content60% 
IMG OID637145249 
Productgroup II intron-encoding maturase 
Protein accessionNP_744001 
Protein GI26988576 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0227105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAG TAGGCGTCGC CGTCTCGTTG GTAACCGTAA TGCAGAAATT TCCCACAGCG 
GAAACTGTCA TCCCGAATCC CGGCCAGAAG CCGAGGGTGA TGCCTGACAG TGCAAAGGTG
CCGGCGGCGT CAGCGACGTG GACGAACGCG GAGCCGGACA CGCTGATGGA GCGGGTGCTT
GCACCGGCCA ACCTCAGGCG TGCGTATCAA CGCGTGGTTA GCAACAAGGG GGCTCCGGGT
GCCGATGGCA TGACGGTCGC TGACTTGGCG GGCTACGTGA AACAGTATTG GCCAACCCTC
AAGGCCAGGT TGCTGGCCGG TGAATACCAT CCCCAAGCAG TGCGAGCGGT TGAAATTCCC
AAGCCGCAGG GCGGCACACG GCAACTGGGT ATCCCCAGCG TCGTGGATCG CCTGATCCAG
CAAGCACTGC AGCAGCAGCT CACACCTATC TTCGACCCAC TGTTCTCGGA CTACAGCTAT
GGTTTTCGTC CGGGCAGAAG TACGCATCAA GCCATCGAGA TGGCCCGTGC TCATGTGACA
GCGGGACACC GCTGGTGCGT GGAACTCGAT CTGGAGAAGT TTTTCGATCG GGTCAATCAC
GACATCCTCA TGGCCTGCAT CGAACGTCGG ATCAAAGACA AGTGCGTACT CAGGCTTATT
CGCCGCTACC TTGAAGCCGG GATCATGTCG GGCGGTGTCG TCAGCCCACG GCAGGAGGGG
ACGCCGCAAG GCGGCCCGCT TTCGCCGTTG CTGTCGAATA TCCTGCTCGA CGAACTCGAC
CGCGAGCTGG AGCGGCGGGG CCATCGCTTC GTACGTTATG CCGATGATGC GAACATCTAT
GTACGCAGTC CCCGGGCCGG CGAACGGGTG TTGGTCAGCG TCGAGCGCTT CCTGAGAGAA
CGTCTGAAGC TGACGGTGAA CAGGAAGAAA AGCCAAGTGG CAAGGGCGTG GAAGTGCGAC
TACCTAGGCT ATGGGATGAG CTGGCACCAG CAGCCAAGGC TGCGCGTGGC AAGGATGAGC
CTAGACCGCT TACGCGACCG GCTCAGAATG CTGCTGCGCA GCGTACGGGC TCGCAAAATG
GCGACTGTCA TCGAGCGGAT CAACCCCGTC CTGAGAGGCT GGGCTAGCTA CTTCAAGCTC
AGCCAGAGCA AGCGGCCGCT TGAGGAACTG GATGGTTGGG TCAGGCACAA ACTCCGCTGC
GTCATCTGGC GTCAATGGAA GCAGCCTCCC ACGAGGCTGA GAAACTTGAT GCGCCTGGGG
TTGAGCGAGG AGCGTGCCAA CAAGTCAGCC TTCAATGGCC GAGGTCCATG GTGGAATTCG
GGAGCGCAAC ATATGAACTA CGCGCTGCCA AAGAAACTGT GGGACCGGCT CGGGCTGGTC
TCGATACTGG ATACGATTAA CCGGCTTAGC CGCGTAACCT GA
 
Protein sequence
MPPVGVAVSL VTVMQKFPTA ETVIPNPGQK PRVMPDSAKV PAASATWTNA EPDTLMERVL 
APANLRRAYQ RVVSNKGAPG ADGMTVADLA GYVKQYWPTL KARLLAGEYH PQAVRAVEIP
KPQGGTRQLG IPSVVDRLIQ QALQQQLTPI FDPLFSDYSY GFRPGRSTHQ AIEMARAHVT
AGHRWCVELD LEKFFDRVNH DILMACIERR IKDKCVLRLI RRYLEAGIMS GGVVSPRQEG
TPQGGPLSPL LSNILLDELD RELERRGHRF VRYADDANIY VRSPRAGERV LVSVERFLRE
RLKLTVNRKK SQVARAWKCD YLGYGMSWHQ QPRLRVARMS LDRLRDRLRM LLRSVRARKM
ATVIERINPV LRGWASYFKL SQSKRPLEEL DGWVRHKLRC VIWRQWKQPP TRLRNLMRLG
LSEERANKSA FNGRGPWWNS GAQHMNYALP KKLWDRLGLV SILDTINRLS RVT