Gene PP_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1819 
Symbol 
ID1043282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2044784 
End bp2046724 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content66% 
IMG OID637145221 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionNP_743974 
Protein GI26988549 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACGA GCAAGCACGG TGTGCTGGCC AACCTGGGCA TGGCCCGCAA ACTTGGCCTG 
GGCTTTGCCT TGGTGCTGCT GCTGACGCTG GCGGTCGCGG CCATCGGCGT CGTGGCGTTG
CAAAGCGTTG GCCAGCGCTT CGACAGCTTG CGTCAGCTGG CCCAGTTCAA TACCGACTTA
CTGCGCTTGC GCGAGCATGA GCAGGCGTTT GCCCTGCGCT CCGACATGCA GCAGGCCGAC
GCTTTGCGTG GCGGCCTGCA GGGTTTGGTC GAACGCGCCC GAGGCCTGCC GGCGCTGGCA
GCGGCACAAA CCGATCTCGC CGCCTATGGC CAGGCATTCG AAGCCTTTGT CGAGGCCGTG
CAAGCCAAGG AGCTGGCGCT GGACATGGCC AGCTGGTCGG TGTCCAACGT GTCCAACAAC
CTTGATGTGC TGCAGGCCGG CCTGGCCGAT GACGGCGTGT ACACCCTCAA GCAGTCCCAG
GGCCAGCAGG GTGGCGAGTT TCTTGAGCAA GCCGCGCAGG TGGCCCAGGT GTCGCGGCTG
ATGCTGCAGG CCATGGACGA AGCACGGGTA CGCCTGGAAA AAAGCCGCAA GGGCGAGGAG
GGTGTGAGCC AGGAGCGTAT TGCCCAGACG GTGGAGGCCG CTGGCCTGGT CAGCCAGTTG
CAAGGCGCGG TTGGCGATGC CGGTTACCAG AGTGTGTTGG GCGAAGTGGC GGGGCACATT
GGCAGTTTTT CGGAAAAACT CAACGAATAC ACCGACCAGC TGGCCCGCGA GCAGGGGCTG
AAGGCGCAGT TGCAAGCCAG CGCCGAGCGG GTTACCGGGC GTGTCGACCA AGCCTATCTT
GGGCAGGAGC AGGCCCTGCA AGGCGAGCTG CAGCGCAATG CCATCGCCAT CGGCCTGGCC
ACGGCGCTGG CGTTGCTTGT CGGCGTGTTG GCGGCCTGGC TGATTACCCG CGCTGTGGTC
GGCCCGTTGA AGCATGTGAT CGCCCGCGCC CAGCGCATTG CGGCGGGTGA ACTGGGCTTC
GACGCCCAGG CGCCGCGCCG GGATGAGGTG GGGCAACTGA TGCAGGCCAT GCAGCAGATG
GCGGCGGGGC TCTCGGGCAT TGTCAGCGGC TTGCAGCAGG GTATCGAACA ATTGGCCGGC
AGCGCCCAGG CGTTGTCGAC GGTGACCGAG CAGACCAACC GTGAGGTGGG CAGCCAGAAG
GAGGAAACCG AACAGGTGGC GACCGCCATG CAGCAGATGA CTGCCACCGT GCACGATGTG
GCGCGCAATG CCGAGGAGGC GGCGCAGGCA GCCCAGGCCG CGGACGAGAA GGTCGACACC
GGCCAGCAGG TGGTGCGCCA GAGCATGCAG CGCATCGAGC AACTGGCGTC GGCGGCAGAA
GCTGCCAGCG CCGGCATCGA CAGCCTCAGT GCCGAAATCC ACACCATTGG TGACGTGCTG
GAAGTGATCA AGAGCGTGGC CGAGCAAACC AACCTGCTGG CGCTGAATGC CGCCATCGAG
GCTGCCCGCG CCGGCGAGCA GGGGCGCGGC TTTGCCGTGG TGGCCGATGA AGTGCGCGCG
CTGGCGCGGC GTACCCGGCA ATCCACCGAG CAGATCGAAA CCTTGGTGGC CAGCCTGCGC
GGCAATGCCC AGCAGTCGGT GGCGCAGATC CGCGGCAGTA CCGAGCTGGT ACGGCTGGCC
GTGGCCGATG CACTGCAGAC CGAAAGTGCG CTGGGCAGCA TTGCCGCAGC GGTGTCATTG
ATTCAGCAGA TGAACCAGCA GATTGCCGCA GCCGCCGAGC AGCAGAGTTC GGTGGCGGAA
GAGATCAGCC GCAGTGTCAC GCAGATTCGC GGCAGTGCGG ATCAGGCGGC ATTGGCGATG
CAGGACAATG CCCGGTCCAG TGTCGAGCTG GCGCAGCTGG GCACCGATTT GAAGGGCATG
GTGGGGCATT TCAGGTTGTA A
 
Protein sequence
MGTSKHGVLA NLGMARKLGL GFALVLLLTL AVAAIGVVAL QSVGQRFDSL RQLAQFNTDL 
LRLREHEQAF ALRSDMQQAD ALRGGLQGLV ERARGLPALA AAQTDLAAYG QAFEAFVEAV
QAKELALDMA SWSVSNVSNN LDVLQAGLAD DGVYTLKQSQ GQQGGEFLEQ AAQVAQVSRL
MLQAMDEARV RLEKSRKGEE GVSQERIAQT VEAAGLVSQL QGAVGDAGYQ SVLGEVAGHI
GSFSEKLNEY TDQLAREQGL KAQLQASAER VTGRVDQAYL GQEQALQGEL QRNAIAIGLA
TALALLVGVL AAWLITRAVV GPLKHVIARA QRIAAGELGF DAQAPRRDEV GQLMQAMQQM
AAGLSGIVSG LQQGIEQLAG SAQALSTVTE QTNREVGSQK EETEQVATAM QQMTATVHDV
ARNAEEAAQA AQAADEKVDT GQQVVRQSMQ RIEQLASAAE AASAGIDSLS AEIHTIGDVL
EVIKSVAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRA LARRTRQSTE QIETLVASLR
GNAQQSVAQI RGSTELVRLA VADALQTESA LGSIAAAVSL IQQMNQQIAA AAEQQSSVAE
EISRSVTQIR GSADQAALAM QDNARSSVEL AQLGTDLKGM VGHFRL