| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1813 |
|---|
| Symbol | |
|---|
| ID | 1043288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2039896 |
|---|
| End bp | 2040234 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637145215 |
|---|
| Product | competence protein ComEA helix-hairpin-helix repeat protein |
|---|
| Protein accession | NP_743968 |
|---|
| Protein GI | 26988543 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGACCA TGCGCAATAA CGTTCTGTCG TACCTGCTGC TGCCGCTGTT CGCCAGTCTG
TCGTTCTCCC TGAGCGCCGC CCCGGCCAGC ACCATGGCTG TGCCCGAACC GGTGCCGGTG
GTGGCCCAGG CCCAGCAGGC GCCAAGGCTG GACTTGAACA CGGCGGATGC ACTTACCCTG
CAAAAGGAGC TGAACGGCAT TGGCAAGGCC AAGGCGGAGG CTATCGTGGC CTACCGCGAG
GCCAATGGGC CGTTTGCTTC AGTGGATGAG CTGCTGGAGA TAAAGGGGAT AGGCAATGCG
TTGCTGGAGC GCAACCGGGA CAAGGTGATG GTGGAGTAA
|
|---|
| Protein sequence | MLTMRNNVLS YLLLPLFASL SFSLSAAPAS TMAVPEPVPV VAQAQQAPRL DLNTADALTL
QKELNGIGKA KAEAIVAYRE ANGPFASVDE LLEIKGIGNA LLERNRDKVM VE
|
|---|
| |