| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1790 |
|---|
| Symbol | |
|---|
| ID | 1043314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2006663 |
|---|
| End bp | 2007358 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637145193 |
|---|
| Product | acylneuraminate cytidylyltransferase, putative |
|---|
| Protein accession | NP_743946 |
|---|
| Protein GI | 26988521 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0169338 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATG AAAAAACGAC GTGTTTTCTG CCCTGCCGAA AAGGCAGCGA ACGCATTCCG
AATAAAAATA TAAAACCATT TGGCGGCCAC GAATTCGGCT TGATTGAAAT CAAGTTGAAG
CAACTGCTTC AAGCAGACGC TGTTGATTCC ATCGTACTGA GCACCAACGA CGAAAGCATC
CTTGACTACG CCTCATCGCT TCAAAATAAT AAAATCAAAC TTCATAAGCG ACGAGAAGAC
CTATCTTCCA GCCAGACCAG CACTGACCAG TTGGTGGCGC ATGCGCTTGA GTTGATAGGC
GAAGGTAATA TCTTGTGGAC CCACGTTACT TCGCCATTCC TCAGCGCCAG TCATTACAAC
GAAATCATAA AGCTTCACAA TGAGAAAGTA CTGGACGGGT ACGACTCCTT GATGACCACA
AATTTGCTAC ACGGCTTCCT CTGGCAAAAT GGCGAAGCCA TGAACTATGA CAGAAACCTA
GAGAAATGGC CGAGAACGCA AACTCTCACC CCAGTACATG AAGTAAACAG TGGTGTATTT
CTTGCTCATG CAACTATTTA CAGGGAGTTA GATGACCGAA TTGGTCGTAA ACCCTACCTT
CATCCACTGG GCAAACTGAT CAGCCATGAC ATTGACTGGC CGGAAGACTT CACAATCGCT
GAATGCCTGC TAGAAAAAGG TTTGGTTACC CTATGA
|
|---|
| Protein sequence | MKYEKTTCFL PCRKGSERIP NKNIKPFGGH EFGLIEIKLK QLLQADAVDS IVLSTNDESI
LDYASSLQNN KIKLHKRRED LSSSQTSTDQ LVAHALELIG EGNILWTHVT SPFLSASHYN
EIIKLHNEKV LDGYDSLMTT NLLHGFLWQN GEAMNYDRNL EKWPRTQTLT PVHEVNSGVF
LAHATIYREL DDRIGRKPYL HPLGKLISHD IDWPEDFTIA ECLLEKGLVT L
|
|---|
| |