| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1778 |
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| Symbol | |
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| ID | 1043335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1986743 |
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| End bp | 1987537 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637145181 |
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| Product | lipopolysaccharide ABC export system, permease protein |
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| Protein accession | NP_743934 |
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| Protein GI | 26988509 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.324664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00255236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTGGCA TGATCAAAGG TATATGGAGC TATCGAGGCT TCATTATCTC TTCAATCAAG
AACGAATTCA TTTCACGCTT TGCGCGAAGC AAACTGGGCG GGCTGTGGAT GATTATTCAT
CCCCTGGCCC AGGTCGCCAT CTATGCGCTG ATCCTGTCCA ACGTACTGGC CGCGAAGCTG
CCAGGCATTG ACAATAAATA CGCTTATGCC TTGTACCTGA TGGCCGGCAT TCTGGCCTGG
AACCTGTTTG CCGAGATCGT CAGTCGGTGC CTGACGCTAT TTATCGAGCA GGGCAATATT
ATGAAAAAGA TGCGCTTTCC GCGTATTACG CTACCGGTTA TCGTGGTGGG CTCGTGTTTG
CTGAACAATG TCTTGTTGTT CGCAGCAGTG ATGCTGGTTT TCTCATTACT TGGCCACTAT
CCGACGCTGC AGATACTTTG GCTAATCCCG TTGGTGATGA TCGTCGTTGC ATTAAGCGTT
GGCATTGGCC TAGTGTTGGG TATTCTCAAT GTTTTTCTGC GGGATGTCGG TCAGGTAGTG
CCCATCGTGC TGCAGGTGTT GTTCTGGTTT ACCCCAATCG TTTACATGGT CAATGTGATA
CCTGAACACC TTCGGGCCAC CCTTAGTTTT AACCCCATGT ATCCCATTGT TACTGCCTAT
CACGACGTAC TCCTGTACGC TAAAGCGCCT GATTTGAGTC AGGCGGTTGT CATGACCGGG
ATTTCCTTTG GTCTGTTGTT GCTTGGCCTG TTCCTGTTTC GTCGGTCTGT GCCTGAAATG
GTGGATGTAC TATGA
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| Protein sequence | MFGMIKGIWS YRGFIISSIK NEFISRFARS KLGGLWMIIH PLAQVAIYAL ILSNVLAAKL
PGIDNKYAYA LYLMAGILAW NLFAEIVSRC LTLFIEQGNI MKKMRFPRIT LPVIVVGSCL
LNNVLLFAAV MLVFSLLGHY PTLQILWLIP LVMIVVALSV GIGLVLGILN VFLRDVGQVV
PIVLQVLFWF TPIVYMVNVI PEHLRATLSF NPMYPIVTAY HDVLLYAKAP DLSQAVVMTG
ISFGLLLLGL FLFRRSVPEM VDVL
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