| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1756 |
|---|
| Symbol | |
|---|
| ID | 1043412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1959215 |
|---|
| End bp | 1959739 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637145159 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_743912 |
|---|
| Protein GI | 26988487 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3184] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.150653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTC TCCGTGTCCT TTGTGCCGCC GTTGCCCTGG TTTGCGCCAG CGGCCAGGTA
CTCGCTGCCA CCGCCAGCCA CAACGCTGCT GCCGAGAAAT TCCTGACCCT GGCCAACGCC
GACAAGCTGG GCACCCCGGT GTACATGCAA GTGCAGCAGA TGTTCGCCCA GCGTTTCGCC
CAGACCAAGG CCCCGGCCGC CAAGCAGCCC GTGCTGGAAA GCTACCAGGC CAAGGCCAAT
GCCGCGCTGG ACAACGCCAT CGGCTGGAAC AAGCTCAAGC CGAAGATGGT CGACCTGTAC
ACCCGGACCT TCACCGAGCA GGAGCTGAAG GACCTGGTCA AGTTCTACGA ATCGCCGCTG
GGCAAGAAAG TGCTGCGTGA AATGCCCAAG GTCACCCAGC AGTCGGCACA GCTGACCCAG
CAGAGCCTGG AGCCAGCAGT GCCGGTGGTG AACAAGCTGC TGGAAGACAT GACCAAAGAG
CTGGACCCGA ACGCAGGCAA GGCCGCCGCC CCAGCGAAGA AGTGA
|
|---|
| Protein sequence | MTRLRVLCAA VALVCASGQV LAATASHNAA AEKFLTLANA DKLGTPVYMQ VQQMFAQRFA
QTKAPAAKQP VLESYQAKAN AALDNAIGWN KLKPKMVDLY TRTFTEQELK DLVKFYESPL
GKKVLREMPK VTQQSAQLTQ QSLEPAVPVV NKLLEDMTKE LDPNAGKAAA PAKK
|
|---|
| |