Gene PP_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1742 
Symbol 
ID1043433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1942524 
End bp1942835 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content57% 
IMG OID637145145 
Producthypothetical protein 
Protein accessionNP_743898 
Protein GI26988473 
COG category[S] Function unknown 
COG ID[COG3162] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA GCATTTACCT CTCGATACAA AACAGCCCCC GTTTCAAGGA GCTGGTCACC 
AAACGCGAAC GGTTCGCCTG GATTCTCTCG GCGATCATGC TCGGCCTGTA CTGCGCCTTC
ATCCTCCTGA TCGCCTACGG TCCTCATGTG CTGGGCGCCA AGCTCAGTCC TGAGTCATCG
ATTACCTGGG GCATTCCCCT GGGCGTCGGC CTGATCGTTT CGGCATTCGT CCTGACCGCC
ATCTACGTGC GCCGCGCCAA CGGCGAATTC GATGAGCTGA ACAAGGAAAT CCTGAAGGAG
GCGCAACAAT GA
 
Protein sequence
MNDSIYLSIQ NSPRFKELVT KRERFAWILS AIMLGLYCAF ILLIAYGPHV LGAKLSPESS 
ITWGIPLGVG LIVSAFVLTA IYVRRANGEF DELNKEILKE AQQ