Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1719 |
Symbol | prc |
ID | 1043459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1918339 |
End bp | 1920453 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637145123 |
Product | carboxyl-terminal protease |
Protein accession | NP_743876 |
Protein GI | 26988451 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0889073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0338124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGATC AATTGCCTCC ACGTCGAATC AGCATGAAGC ATTTCCTTCC AAGCACCGCA CTGGCTGTGA TGATCGGCCT GGGCAGCCTC ACGCTCGGCG GCAATGCGGC GGCCGCCAAC AAGTGGGACA GCCTGCAGCC CGACCGCGAC GAGATCGTCG CCAGCCTCAA CGTGGTGGAA TTGCTCAAGC GCCACCACTA CAGCAAGCCG CCCCTGGACG ATGCCCGTTC GGTCATTATC TACGACAGCT ACATCAAGCT GCTGGACCCG GCGCGCAGCT ACTTCACCGC TGCCGACATT GCCGAATTCG ATAAATGGAA AACGCAATTC GACGATTTCC TCAAGAGCGG CAACCTGGAC CCGGGCTTCA CCATCTACAA GCGCTACCTC GACCGCGTCA AGCAACGCCT GGACTTCGCC CTGGCCGAGC TGAACAAGGG TGTGGACAAG ATTGACTTCA CCACCAAGGA AACCTTGCTG ATCGACCGCA AGGACGCGCC GTGGATGAAG AACCAGGCCG AGCTCGACGA CTTGTGGCGC AAACGCGTCA AAGACGAAGT GCTGCGCCAG AAGATCGCCG GCAAGGAACC CAAGCAGATC CAGGAAACCC TGATCAAGCG CTACAAGAAC CAGCTCACGC GCCTGGACCA GACCCGTGCC GAGGACATCT TCCAGGCCTA CATCAACACC TTTGCCCAGT CCTACGACCC ACACACCAAC TACCTGTCGC CGGACAACGC CGAAAACTTC GACATCAACA TGAGCCTGTC GCTCGAAGGC ATTGGTGCAG TGCTGCAAAG CGACAACGAC CAGGTCAAGA TCGTGCGCCT GGTGCCAGCG GGCCCGGCAG CCAAGACCAA GCAGGTGGCA CCGGCTGACA AGATCATCGG CGTGGCCCAG GGCAACAAGG AGATGGTCGA CGTGGTGGGC TGGCGCCTGG ACGAAGTGGT CAAGCTGATC CGCGGCCCGA AAGGCTCGGT GGTGCGCCTG GAAATCATCC CGGCCAGCAA TGCGCCTAGT GACCAGACCA GCAAGATTGT GTCGATCACC CGTGAAGCGG TGAAGCTTGA AGAACAGGCG GCGAAGAAGT CGGTGCTCAA GCTCAAGCAG GACGGGCGTG ACTACAAGCT GGGCATCATC GAGATCCCGG CCTTCTACCT GGACTTCAAG GCCTACCGCG CTGGCGACCC CGAGTACAAG AGCACCACGC GTGACGTGAA GAAGCTGCTC ACCGAACTGC AGAAAGAGAA AGTCGACGGC GTGGTCATCG ACCTGCGCAA CAACGGCGGC GGCTCGCTGC AGGAAGCCAC CGAGCTGACC AGCCTGTTCA TCGAGAAAGG CCCGACCGTG CTGGTGCGCA ACAGCGATGG CCGTGTCGAC GTGCTGGAAG ACGAAAACCC GGGGGCCTTC TACAAGGGCC CGCTGGCACT GCTGGTCAAC CGCCTGTCGG CCTCGGCATC GGAGATCTTC GCCGGTGCCA TGCAGGACTA CCACCGCGCG CTGATCATCG GTGGCCAGAC CTTCGGCAAA GGCACCGTGC AGACCATCCA GCCGCTCAAC CATGGCGAGC TGAAGCTGAC CCTGGCCAAG TTCTACCGGG TTTCCGGGCA GAGTACCCAG CATCAGGGGG TACTGCCGGA CATCGACTAC CCCTCGATCA TCGACACCAA GGAAATCGGC GAGAGCGCCC TGCCAGAGGC CATGCCGTGG GACACCATCC GCCCGGTGGT CAAGCCTGCG GCCGATCCGT TCAGGCCGTT CCTGGCCCAG CTCAAGGCGC AACATGAGGC GCGCAGCGAC AAGGATGCCG AGTTCACCTA CATCCGCGAC CGCCTGGCCC TGACCCAGAA GCTGATGAAC GAGAAAACCG TCAGCCTCAA CGAGCAGGAA CGCCGCGCAC GCCACGACAG CATCGAGAGC AAGCAACTGG CGCTGGAAAA CACCCGCCGC AAGGCCAAGG GTGAAGAACC GCTGAAAGAG CTGAAGAAAG AGGACGAAGA CGCTCTGCCG GTCGAGGATG AAAATACCAA GCCGGAAGAC GACGCTTACC TCGCGGAAAC CGGTCGCATC CTGATCGACT ACCTCAGTGC CAGCACCAAG GTGGCCAAGA AGTAA
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Protein sequence | MRDQLPPRRI SMKHFLPSTA LAVMIGLGSL TLGGNAAAAN KWDSLQPDRD EIVASLNVVE LLKRHHYSKP PLDDARSVII YDSYIKLLDP ARSYFTAADI AEFDKWKTQF DDFLKSGNLD PGFTIYKRYL DRVKQRLDFA LAELNKGVDK IDFTTKETLL IDRKDAPWMK NQAELDDLWR KRVKDEVLRQ KIAGKEPKQI QETLIKRYKN QLTRLDQTRA EDIFQAYINT FAQSYDPHTN YLSPDNAENF DINMSLSLEG IGAVLQSDND QVKIVRLVPA GPAAKTKQVA PADKIIGVAQ GNKEMVDVVG WRLDEVVKLI RGPKGSVVRL EIIPASNAPS DQTSKIVSIT REAVKLEEQA AKKSVLKLKQ DGRDYKLGII EIPAFYLDFK AYRAGDPEYK STTRDVKKLL TELQKEKVDG VVIDLRNNGG GSLQEATELT SLFIEKGPTV LVRNSDGRVD VLEDENPGAF YKGPLALLVN RLSASASEIF AGAMQDYHRA LIIGGQTFGK GTVQTIQPLN HGELKLTLAK FYRVSGQSTQ HQGVLPDIDY PSIIDTKEIG ESALPEAMPW DTIRPVVKPA ADPFRPFLAQ LKAQHEARSD KDAEFTYIRD RLALTQKLMN EKTVSLNEQE RRARHDSIES KQLALENTRR KAKGEEPLKE LKKEDEDALP VEDENTKPED DAYLAETGRI LIDYLSASTK VAKK
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