| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1650 |
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| Symbol | gacS |
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| ID | 1044739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1842036 |
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| End bp | 1844789 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145050 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | NP_743807 |
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| Protein GI | 26988382 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.1856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGATC GCTTGGGAAT CCGCAGCCGG GTACTGCTGC TGGCACTGCT ACCGGCCGGC
TTGATGGCCC TGGTGCTGGG TAGCTATTTC ACCTGGCTGC AACAGAACGA CCTGCGCACC
CAGCTGCTGC AGCGCGGCAA GATGATCGCC GAACAACTGG CGCCCCTGGC CGCACCCGCC
ATGGCCCGGC TCGCGCCTGC GCAACTGGAG AGAATTGCCG CACAAACCCT GGAGCAGGCC
GATGTGCGCG CAGTGGCGTT TCTGGCCCCG GACCGCACGC GCCTGGCCCA CGCCGGCCCG
AGCATGCTCA ATCTGCCGCC CAGCGGCGGT ACCGGCACCC AACTCCTGCA GCGCAGTGGC
AACGACGCCA CCCGCTACCT GATGCCAGTT TTCGGCCACC ACCGCGACCT GGCCACCGAC
GCCGTGCCGG CCGAAGCCGA GCGCCTGCTG GGCTGGGTAG AGATCGAGCT GTCGCACGAC
GGCACGCTGC TGCGCGGCTA CCGCAACCTG TTCACCAGCC TGTTGCTGAT CCTCGCCTGC
CTGGCACTCA GCGGCCTGTT GGCGCTGCGC ATGAGCCGCA CCATCAACGA CCCCATCGAA
CGCATCAAGC ACGCGGTCAA TCAGCTCAAG GACGGCCACC TCGAAGAACG CCTGCCGACC
ATGGGCAGCC ATGAGCTGGA CGAACTGGCC CACGGCATCA ACCGCATGGC CGAAACCCTG
CAGAATGCCC ACGAAGAACT GCAACACAGC ATCGACCAGG CCACCGAAGA CGTGCGCCAG
AACCTGGAAA CCATCGAAAT CCAGAACATC GAGCTGGACA TGGCGCGCAA AGAGGCACTT
GAGGCCAGCC GCATCAAGTC GGAGTTCCTG GCCAACATGA GCCACGAAAT CCGCACCCCG
CTCAATGGCA TCCTCGGCTT TACCCACCTG CTGCAAAAAA GCGAGATGAC ACCGCGCCAG
CTCGACTACC TGAACACCAT CGAGAAGTCT GCTGACAACT TGCTGGGAAT CATCAACGAG
ATCCTCGATT TCTCCAAGAT CGAGGCCGGC AAGCTGGTGC TCGACAGCAT ACCGTTCAAC
CTGCGGGACC TGATCCAGGA CACCCTGACC ATCCTCGCTC CGGCCGCCCA CGCCAAGCAG
CTGGAATTGC TGAGCCTGAT CTACCGCGAC ACACCTGCTT CGCTGGTAGG CGACCCGTTG
CGGCTCAAGC AGATCCTCAC CAACCTGGTC AGCAACGCCA TCAAGTTCAC CCGCGAAGGC
ACCATCGTCG TGCGCGCCAT GCTGGAAGAC GAGCACGAAG ACTGCGCGCA GTTGCGCATC
AGCGTGCAGG ACACCGGCAT CGGCCTGTCA CCTCAGGATG TGCGCACACT GTTCCAGGCC
TTCAGCCAGG CTGACAACTC ACTGGCCCGC CAGCCCGGCG GCACCGGTCT GGGGCTGGTG
ATTTCCAAGC GCCTGATCGA ACAGATGGGC GGCGAGATCG GTGTCGACAG TACCCCGGGC
GAAGGTTCGC AGTTCTGGAT CAGCCTCAAC CTGCCCAAGG CTCATGACGA TGCCGAAGCG
CTGCCACCGC AGCCATTGCT GGGCCGCCGT GCCGCCATTG TCGATGGCCA CGAACTGGCG
CGCCAGGCAC TGGAGCACCA GCTGGAAGAC TGCGGCCTCA GCGTGAGCCT GTTCGCCTCC
TACGACCAGT TGCTGCAGGG GGTGCAGGCC GCCAGCCAGG CCGGCCTGCC CTTCGAGTTC
GCGGTGCTCG GTGCCAACCT GGGTAACCTG TCGCCCGAGC AACTGGGCCA TTATCATCAG
CAGCTCGAGC GTTACCACTG CCAATGCGTA GTGCTGTGCC CGACCACCGA GCAGGCGCTG
TACCACCCGT ACCTGCCCAA CGGCCATGGC CAGTTGCTGT CCAAGCCGAC CTGCACCCGC
AAGCTGCGGC GCCTCTTGCT GGAGCTGGTG CAACCTCGCC GTCCGCTGGC CGAGGGGAGC
AACCCCAACG GCCAGCGACG ACCGAAAATA CTCTGCGTCG ACGACAATGC CGCCAACCTG
CTGCTGGTAA AAACCCTGCT CGAAGACCTG GGTGCCGAGG TACTGGCCGT CAACAATGGT
TATGCGGCGG TACAGGCCGT GCAGGAAGAA TTGTTCGACC TGGTGCTGAT GGATGTGCAG
ATGCCCGGCA TGGACGGCCG CGCCTGTACC GAACAGATCC GCCTGTGGGA GAACACCCAG
AGCGGCAACC CGCTGCCGAT CGTCGCCCTC ACTGCCCATG CCATGGCCAA CGAAAAACGC
GCGTTGTTGC ACAGCGGCAT GGACGACTAC CTGACCAAAC CGATCAGCGA ACGGCAACTG
GCCCAGGTGG TGATGAAGTG GACCGGCCTG AGCCTGGGCA CACCGCAGCA GGCGCAGGCC
GAGCTGCTGA CCAACGGCGA CGAACTGAAG GTACTCGACC CCGAAGAGGG CCTGCGCCTG
GCCGCTGGCA AGGCAGATCT GGCCGCTGAC ATGCTGAGCA TGCTGCTGGC CTCCCTGGAT
ACGGACCGCG AAGCCATACG CGCCGCCCGC GCAGCCGATG ACCGAAATGG CCTGATCGAG
CAGGTACACC GTCTGAACGG TGCCTCACGC TATTGCGGCG TGCCGCAGTT ACGGGCAGCG
TGTCAACGCA GCGAGACCTT GCTGAAGCAG GACAATCCCC AGGCGCAGCA GGCCCTGGAT
GAACTGGACA GCGCGATCAG CCGGCTGGCG GCACAGGCCA GATTGAGCGC TTGA
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| Protein sequence | MLDRLGIRSR VLLLALLPAG LMALVLGSYF TWLQQNDLRT QLLQRGKMIA EQLAPLAAPA
MARLAPAQLE RIAAQTLEQA DVRAVAFLAP DRTRLAHAGP SMLNLPPSGG TGTQLLQRSG
NDATRYLMPV FGHHRDLATD AVPAEAERLL GWVEIELSHD GTLLRGYRNL FTSLLLILAC
LALSGLLALR MSRTINDPIE RIKHAVNQLK DGHLEERLPT MGSHELDELA HGINRMAETL
QNAHEELQHS IDQATEDVRQ NLETIEIQNI ELDMARKEAL EASRIKSEFL ANMSHEIRTP
LNGILGFTHL LQKSEMTPRQ LDYLNTIEKS ADNLLGIINE ILDFSKIEAG KLVLDSIPFN
LRDLIQDTLT ILAPAAHAKQ LELLSLIYRD TPASLVGDPL RLKQILTNLV SNAIKFTREG
TIVVRAMLED EHEDCAQLRI SVQDTGIGLS PQDVRTLFQA FSQADNSLAR QPGGTGLGLV
ISKRLIEQMG GEIGVDSTPG EGSQFWISLN LPKAHDDAEA LPPQPLLGRR AAIVDGHELA
RQALEHQLED CGLSVSLFAS YDQLLQGVQA ASQAGLPFEF AVLGANLGNL SPEQLGHYHQ
QLERYHCQCV VLCPTTEQAL YHPYLPNGHG QLLSKPTCTR KLRRLLLELV QPRRPLAEGS
NPNGQRRPKI LCVDDNAANL LLVKTLLEDL GAEVLAVNNG YAAVQAVQEE LFDLVLMDVQ
MPGMDGRACT EQIRLWENTQ SGNPLPIVAL TAHAMANEKR ALLHSGMDDY LTKPISERQL
AQVVMKWTGL SLGTPQQAQA ELLTNGDELK VLDPEEGLRL AAGKADLAAD MLSMLLASLD
TDREAIRAAR AADDRNGLIE QVHRLNGASR YCGVPQLRAA CQRSETLLKQ DNPQAQQALD
ELDSAISRLA AQARLSA
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