Gene PP_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1637 
Symbol 
ID1044797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1833094 
End bp1834020 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content60% 
IMG OID637145037 
ProductLysR family transcriptional regulator 
Protein accessionNP_743794 
Protein GI26988369 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.841057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCA CACTCCGTCA AATGCAAGTC TTCGTCGCCG TCGCCCAGCA CCAAAGCGTC 
TCTCGGGCCG CCAGCCTGTT GGCGCTGTCG CAGTCGGCCG CCAGTACCTC TATCACGGAA
CTGGAGCGGC AATCGAGCTG CCAGCTGTTC GACCGTGCCG GCAAACGCCT GGCCCTCAAT
GCCCTGGGCC ATCAATTGCT GCCACAAGCA GTAGCCCTGC TTGACCAGGC CAAGGAAATC
GAAGACCTGC TCAACGGCAA ATCCGGTTTC GGCTCACTGG CGGTCGGCGC CACGCTCACC
ATCGGCAACT ACCTGGCCAC CCTGCTGATC GGCAACTACA TGCAGACACA CCCGGAAAGC
CAGGTAAAAC TGCATGTTCA AAATACTGCG CATATCGTGC AACAGGTCGC GCACTACGAA
ATTGATCTGG GTCTAATCGA AGGTGACTGC AATCACCCCG ACCTGGAAGT TCAGCCGTGG
GTCGAGGACG AACTGGTGGT GTTCTGTGCG CCACAGCACC CACTGGCGAA ACTGGGCCGC
GCCGATATCG AAAGCCTTTC GCAAGAGGCG TGGATCCTGC GCGAACAAGG CTCAGGCACG
CGCCTGACCT TCGACCAGGC CATGCGCCAT CACCGCGCCA ACCTCAATAT TCGCCTGGAG
CTGGAGCACA CCGAAGCGAT CAAGCGCGCG GTGGAGTCGG GCCTGGGCAT CGGTTGCATT
TCACGTCTGG CCCTGCGTGA CGCCTTCCGC CGTGGCAGCC TGGTACCTGT GGAAACACCG
GAGCTGGACC TGCTGCGCCA GTTCTACTTC ATCTGGCACA AACAGAAGTA CCAGACCTCG
GCCATGCGTG AGTTTCTCGA GCTATGCCGC AACTTCACTG CGGGCTTTAC CCGCAGTGAC
GAGATCGTGC TGCCGCCGAT CGCTTAA
 
Protein sequence
MRFTLRQMQV FVAVAQHQSV SRAASLLALS QSAASTSITE LERQSSCQLF DRAGKRLALN 
ALGHQLLPQA VALLDQAKEI EDLLNGKSGF GSLAVGATLT IGNYLATLLI GNYMQTHPES
QVKLHVQNTA HIVQQVAHYE IDLGLIEGDC NHPDLEVQPW VEDELVVFCA PQHPLAKLGR
ADIESLSQEA WILREQGSGT RLTFDQAMRH HRANLNIRLE LEHTEAIKRA VESGLGIGCI
SRLALRDAFR RGSLVPVETP ELDLLRQFYF IWHKQKYQTS AMREFLELCR NFTAGFTRSD
EIVLPPIA