Gene PP_1601 details

Gene Information

• Locus tag: PP_1601
• Symbol: lpxD
• ID: 1044945
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 1795689
• End bp: 1796744
• Gene Length: 1056 bp
• Protein Length: 351 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637145001
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: NP_743758
• Protein GI: 26988333
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTGTGA CCATGACGCT AGGCCAGCTG GCCGAGGTAC TCGGAGCTAC CCTCAAGGGG 
CCCGAGGCGC TGCAGATTAC CGGGTTGGCC ACCTTGCAGG AGGCTGGCCC GACGCAGTTG 
AGCTTCCTCG CCAACCCGCA GTACCGCAAG TACCTGGATA ACAGCCAGGC CGGCGCGGTG 
CTGCTCAAGG CTGCGGATGC CGAAAGCTTT GCCGGCAATA CCCTGGTCGT GGCGGACCCG 
TACCTGGCTT ACGCGCGAAT TTCCCACCTG TTCGATCCCA AACCCAAGGC TGAGGCGGGT 
ATACATCCCA GCGCCGTGGT GGCGGAAGAT GCCCAGGTGG ACGCCAGCGC CAGCATCGGG 
CCGTTCGCGG TCATCGAAAG TGGTGCGCGC ATCGGCGCCA ACGTCAGCAT CGGCGCACAC 
TGCTTCATCG GTGCCCGCTG TGTGGTCGGT GAAGGTGGTT GGCTGGCACC GCGGGTCACG 
CTGTATCACG ACGTGACCAT CGGTAAGCGT GTGGTCATCC AGTCGGGTGC CGTGATCGGC 
GGCGAGGGCT TCGGCTTTGC CAACGAAAAG GGCATCTGGC GCAAGATTGC GCAGATCGGC 
GGCGTCACCA TTGGTGATGA CGTGGAGATC GGCGTCAATA CTGCTGTCGA CCGTGGCGCG 
CTGTCCGACA CCCGGATCGG CGACGGGGTC AAGCTGGATA ACCAGATCCA GATCGCTCAC 
AACGTACAGA TCGGTGATCA CACTGCCATG GCCGCTTGCG TCGGAATCTC CGGCAGCACG 
CGCATCGGCA AGCACTGCAT GCTGGCCGGG GGTGTGGGGC TGGTTGGGCA CATCGATATT 
TGCGATAACG TTTTCGTTTC CGGAATGACC ATGGTTACCC GTTCGATCAC TGAACCGGGT 
TCCTATTCTT CCGGCACTGC CATGCAGCCG CTGGCTGACT GGCGCAAGAG CGCCGCGCGT 
ATCCGCCACC TGGACGACAT GGCCAAGCGT CTCCAGCAGC TGGAAAAACG CGTCGATACC 
GTGACCTCAG GTGGCCTGCC GACATCAGAA GGCTGA 

 

Protein sequence

MSVTMTLGQL AEVLGATLKG PEALQITGLA TLQEAGPTQL SFLANPQYRK YLDNSQAGAV 
LLKAADAESF AGNTLVVADP YLAYARISHL FDPKPKAEAG IHPSAVVAED AQVDASASIG 
PFAVIESGAR IGANVSIGAH CFIGARCVVG EGGWLAPRVT LYHDVTIGKR VVIQSGAVIG 
GEGFGFANEK GIWRKIAQIG GVTIGDDVEI GVNTAVDRGA LSDTRIGDGV KLDNQIQIAH 
NVQIGDHTAM AACVGISGST RIGKHCMLAG GVGLVGHIDI CDNVFVSGMT MVTRSITEPG 
SYSSGTAMQP LADWRKSAAR IRHLDDMAKR LQQLEKRVDT VTSGGLPTSE G