Gene PP_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1566 
Symbol 
ID1045357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1760126 
End bp1760827 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID637144966 
Producthead maturation protease, putative 
Protein accessionNP_743723 
Protein GI26988298 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.25183e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGACACA AGGATCGACT GGCGGCGGTC AAATACCGCT CTTTCGACTA TGACGTGAAG 
GCTGTCGGCG ACGATGGCCT TTTTTCTGGC TACGGTTCCG TGTTCGGCGT GGTCGACAGC
TACAACGAGG TCGTCGCACC AGGTGCATTC CTGGAGTCGA TTGCCGAGGC CAAGGCCAAG
GGCCGCACCT TCCCCGTGCT CTGGCAGCAC CGAACCGGCG AGCCCATCGG CAGCTGGAAC
ATTGAAAGCC TGAAGGAGGA CGACCGAGGC CTGTTCGGCG AAGGCGGGCT CTGGCTGGCT
GACGCACCAT ACGCCCGCAT CGCCCACCGG GGCATGCAAA CCCGGTCCAT CACCGGCCTG
TCCATCGGCT ACTACGTCCG CGAGTCGAGC TTCGACGAGA AAACCCGAAT TCGCACGCTG
ACCAAGCTCG ACCTTATCGA GATCTCCATT GTCACCGTGC CAGCCAACGA CGAAGCGCGT
ACCGACACCA TCAAGTCGAA GCTGGCCCAT GGCGGCCTGC CTTCGATGCC CGAATTTGAG
TTGCTCCTGC GCGAGGCAGG CTTCTCGAAA ACCCAGTCGG CGGTGATTGC CAACCGCGGG
CTGCAGCACC TGCTCCGGAG CGAGTCCGCG GGCGACCTGG CAGAACTTGA AATCGTCGAG
GCGCTGAAGT CGCGCCCGGC ACTGTCTCTC CCATCGTTTT GA
 
Protein sequence
MRHKDRLAAV KYRSFDYDVK AVGDDGLFSG YGSVFGVVDS YNEVVAPGAF LESIAEAKAK 
GRTFPVLWQH RTGEPIGSWN IESLKEDDRG LFGEGGLWLA DAPYARIAHR GMQTRSITGL
SIGYYVRESS FDEKTRIRTL TKLDLIEISI VTVPANDEAR TDTIKSKLAH GGLPSMPEFE
LLLREAGFSK TQSAVIANRG LQHLLRSESA GDLAELEIVE ALKSRPALSL PSF