Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1566 |
Symbol | |
ID | 1045357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1760126 |
End bp | 1760827 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144966 |
Product | head maturation protease, putative |
Protein accession | NP_743723 |
Protein GI | 26988298 |
COG category | [R] General function prediction only |
COG ID | [COG3740] Phage head maturation protease |
TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000525183 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGACACA AGGATCGACT GGCGGCGGTC AAATACCGCT CTTTCGACTA TGACGTGAAG GCTGTCGGCG ACGATGGCCT TTTTTCTGGC TACGGTTCCG TGTTCGGCGT GGTCGACAGC TACAACGAGG TCGTCGCACC AGGTGCATTC CTGGAGTCGA TTGCCGAGGC CAAGGCCAAG GGCCGCACCT TCCCCGTGCT CTGGCAGCAC CGAACCGGCG AGCCCATCGG CAGCTGGAAC ATTGAAAGCC TGAAGGAGGA CGACCGAGGC CTGTTCGGCG AAGGCGGGCT CTGGCTGGCT GACGCACCAT ACGCCCGCAT CGCCCACCGG GGCATGCAAA CCCGGTCCAT CACCGGCCTG TCCATCGGCT ACTACGTCCG CGAGTCGAGC TTCGACGAGA AAACCCGAAT TCGCACGCTG ACCAAGCTCG ACCTTATCGA GATCTCCATT GTCACCGTGC CAGCCAACGA CGAAGCGCGT ACCGACACCA TCAAGTCGAA GCTGGCCCAT GGCGGCCTGC CTTCGATGCC CGAATTTGAG TTGCTCCTGC GCGAGGCAGG CTTCTCGAAA ACCCAGTCGG CGGTGATTGC CAACCGCGGG CTGCAGCACC TGCTCCGGAG CGAGTCCGCG GGCGACCTGG CAGAACTTGA AATCGTCGAG GCGCTGAAGT CGCGCCCGGC ACTGTCTCTC CCATCGTTTT GA
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Protein sequence | MRHKDRLAAV KYRSFDYDVK AVGDDGLFSG YGSVFGVVDS YNEVVAPGAF LESIAEAKAK GRTFPVLWQH RTGEPIGSWN IESLKEDDRG LFGEGGLWLA DAPYARIAHR GMQTRSITGL SIGYYVRESS FDEKTRIRTL TKLDLIEISI VTVPANDEAR TDTIKSKLAH GGLPSMPEFE LLLREAGFSK TQSAVIANRG LQHLLRSESA GDLAELEIVE ALKSRPALSL PSF
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