Gene PP_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1555 
Symbol 
ID1045449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1753027 
End bp1754298 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID637144955 
Productphage integrase, putative 
Protein accessionNP_743712 
Protein GI26988287 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.206278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.7649e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAAAATCA GCGATGCAGA GATTCGCCGG CAGGCCGCCG GCCAAGTGCG TGACCTTCGC 
GCCCTGGGCA ACCACGGCCT GTATTTCCGC TTTCATCGCT CCCGCGAGCG CGGGTCGTGG
TACCTGATCC ACAAGGGCAA GTGGAACCTG ATCGGCTCAT ACCCTGAGCT GAGCGCTGCC
AAGGTGGCCG CTGCGCTGCC GGATATCCGC CTGCGCCTGG AAGCCGGCGA GGGATCGAGC
CTGTCGAGCT GGGTGCTGAC TGGCGAGTTG CTGGACTGGT TCGCTGAGCG CATGTCCCGT
GACCGCAGCC TCTCGGCCAA GCGCAAACGC ACGGCGGCGT CGGCGATCAA GCAGCATCTG
GCGCCGCGCC TGGGAGAAAC GCCATTGGCC CAGATCGACA AAGCGCTGCT CGACCGCGAG
CTGATGTGGC CGCTGCAAGA GTCGCTGTCG ATCGACTATG TGCGCCTGGT CTTTCAATTG
CTCGCGTTGG CCTTCCGGCA GGCCGCCAAA CTCGGCCTGA TCAGCACCAA CCCTATGGCC
GGCATCCGCT TCCGTGATTT CTCCAAGGCC AAGGTCACGG TCAAGCCGTC GAGGCTGCGT
GGCGTGCACC TCGAAGACCT GATGGCGCGC ATGAAAAGCA CCCTGGCCCA CAACCCGCAG
CATGGCCTGC TGGCCCTGAT GATGCTGTGC CACGGCACCC GGCTGGGCGA AACCCGCATG
GCCCGCTGGA GCCACATCAG CCTGGCCGAA CGGGAGTGGT TCATTCCCGC CGAGCACACC
AAGACCGGCG TGCAGCACCG CCTGCCACTG ACCGACCAGG TGCGCTTCCT GCTGATGGCC
TGCCGCGAGA TCCAGCTCAA GCAGGGTTAC GAGGGCGAGT TCCTGTTCCC GGGGCGGCAG
GGCAAGCCCA TGAGCGAATC GAAGGCCTCT GCGGTGTTCT CGGTCATGGG GCAGGGCGAG
TGGACCAGCC ACGACCTACG CAAGCTGGCC CGTACCGGTT GGGCTGACCT CGGTGTTGAC
CACCTAGTGG GTGAGCTGCT GATCAACCAC GCCATGGGTC ACAACGTGAA GGTGTACATC
CAGTCCGACG TCATGGCCCG CAAGCGCGAG GCGCTGGAGA AGTGGCACGC ACACCTTGAT
CAGAAGGGTT TCGCCTCGGT TCACGGCTTG ACCGGTGATA GATCAACGGA TTCATGGATT
CTCTGCGAGG TCGCAGGGCG CGCGGGTTTC GACGGCCTTC CGGTATCCAC CATAAGCGAG
GATTCGAAAT GA
 
Protein sequence
MKISDAEIRR QAAGQVRDLR ALGNHGLYFR FHRSRERGSW YLIHKGKWNL IGSYPELSAA 
KVAAALPDIR LRLEAGEGSS LSSWVLTGEL LDWFAERMSR DRSLSAKRKR TAASAIKQHL
APRLGETPLA QIDKALLDRE LMWPLQESLS IDYVRLVFQL LALAFRQAAK LGLISTNPMA
GIRFRDFSKA KVTVKPSRLR GVHLEDLMAR MKSTLAHNPQ HGLLALMMLC HGTRLGETRM
ARWSHISLAE REWFIPAEHT KTGVQHRLPL TDQVRFLLMA CREIQLKQGY EGEFLFPGRQ
GKPMSESKAS AVFSVMGQGE WTSHDLRKLA RTGWADLGVD HLVGELLINH AMGHNVKVYI
QSDVMARKRE ALEKWHAHLD QKGFASVHGL TGDRSTDSWI LCEVAGRAGF DGLPVSTISE
DSK