| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1555 |
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| Symbol | |
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| ID | 1045449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1753027 |
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| End bp | 1754298 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144955 |
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| Product | phage integrase, putative |
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| Protein accession | NP_743712 |
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| Protein GI | 26988287 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.206278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000047649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAAAATCA GCGATGCAGA GATTCGCCGG CAGGCCGCCG GCCAAGTGCG TGACCTTCGC
GCCCTGGGCA ACCACGGCCT GTATTTCCGC TTTCATCGCT CCCGCGAGCG CGGGTCGTGG
TACCTGATCC ACAAGGGCAA GTGGAACCTG ATCGGCTCAT ACCCTGAGCT GAGCGCTGCC
AAGGTGGCCG CTGCGCTGCC GGATATCCGC CTGCGCCTGG AAGCCGGCGA GGGATCGAGC
CTGTCGAGCT GGGTGCTGAC TGGCGAGTTG CTGGACTGGT TCGCTGAGCG CATGTCCCGT
GACCGCAGCC TCTCGGCCAA GCGCAAACGC ACGGCGGCGT CGGCGATCAA GCAGCATCTG
GCGCCGCGCC TGGGAGAAAC GCCATTGGCC CAGATCGACA AAGCGCTGCT CGACCGCGAG
CTGATGTGGC CGCTGCAAGA GTCGCTGTCG ATCGACTATG TGCGCCTGGT CTTTCAATTG
CTCGCGTTGG CCTTCCGGCA GGCCGCCAAA CTCGGCCTGA TCAGCACCAA CCCTATGGCC
GGCATCCGCT TCCGTGATTT CTCCAAGGCC AAGGTCACGG TCAAGCCGTC GAGGCTGCGT
GGCGTGCACC TCGAAGACCT GATGGCGCGC ATGAAAAGCA CCCTGGCCCA CAACCCGCAG
CATGGCCTGC TGGCCCTGAT GATGCTGTGC CACGGCACCC GGCTGGGCGA AACCCGCATG
GCCCGCTGGA GCCACATCAG CCTGGCCGAA CGGGAGTGGT TCATTCCCGC CGAGCACACC
AAGACCGGCG TGCAGCACCG CCTGCCACTG ACCGACCAGG TGCGCTTCCT GCTGATGGCC
TGCCGCGAGA TCCAGCTCAA GCAGGGTTAC GAGGGCGAGT TCCTGTTCCC GGGGCGGCAG
GGCAAGCCCA TGAGCGAATC GAAGGCCTCT GCGGTGTTCT CGGTCATGGG GCAGGGCGAG
TGGACCAGCC ACGACCTACG CAAGCTGGCC CGTACCGGTT GGGCTGACCT CGGTGTTGAC
CACCTAGTGG GTGAGCTGCT GATCAACCAC GCCATGGGTC ACAACGTGAA GGTGTACATC
CAGTCCGACG TCATGGCCCG CAAGCGCGAG GCGCTGGAGA AGTGGCACGC ACACCTTGAT
CAGAAGGGTT TCGCCTCGGT TCACGGCTTG ACCGGTGATA GATCAACGGA TTCATGGATT
CTCTGCGAGG TCGCAGGGCG CGCGGGTTTC GACGGCCTTC CGGTATCCAC CATAAGCGAG
GATTCGAAAT GA
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| Protein sequence | MKISDAEIRR QAAGQVRDLR ALGNHGLYFR FHRSRERGSW YLIHKGKWNL IGSYPELSAA
KVAAALPDIR LRLEAGEGSS LSSWVLTGEL LDWFAERMSR DRSLSAKRKR TAASAIKQHL
APRLGETPLA QIDKALLDRE LMWPLQESLS IDYVRLVFQL LALAFRQAAK LGLISTNPMA
GIRFRDFSKA KVTVKPSRLR GVHLEDLMAR MKSTLAHNPQ HGLLALMMLC HGTRLGETRM
ARWSHISLAE REWFIPAEHT KTGVQHRLPL TDQVRFLLMA CREIQLKQGY EGEFLFPGRQ
GKPMSESKAS AVFSVMGQGE WTSHDLRKLA RTGWADLGVD HLVGELLINH AMGHNVKVYI
QSDVMARKRE ALEKWHAHLD QKGFASVHGL TGDRSTDSWI LCEVAGRAGF DGLPVSTISE
DSK
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