Gene PP_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1554 
Symbol 
ID1045450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1752590 
End bp1753012 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID637144954 
Producthypothetical protein 
Protein accessionNP_743711 
Protein GI26988286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.272176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.24297e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCAATC AGCGCCCCCC GTTTCGTAAC CCGGCCCGCG CCAAGCCCGT CGACCGGGAA 
GGGCAGGAGC AGGCTGCCCT GCTCGAAGAG ATTCAGCTGC GCTATCCGGA TGTGTACGAG
CTGATCTGCC ACGTCCCGAA TGGCGGCCAT CGGCACAAGG GCGTGGCGCT CAAGCTCAAA
GCCCAGGGCG TAAAGGCCGG CATCCCCGAT CTGGTCCTGA CCATGGCTCG CGGCGGTTAC
TTCGGCTTGT ACATCGAATT CAAGGCGACC GTAGACCCGG CGCCTGTTTC GTCCAGCCAG
CAAGCGTGCA TTCGCCGGCT GAACGACCAA GGCTACCTGG CCGTTGTGTG TCAGGGGCAT
TTCGACGCCA TGGCGTGCCT GAGGGCGTAC CTGGCCCTGC CAAAAACGGA GGTTGCAGCA
TGA
 
Protein sequence
MTNQRPPFRN PARAKPVDRE GQEQAALLEE IQLRYPDVYE LICHVPNGGH RHKGVALKLK 
AQGVKAGIPD LVLTMARGGY FGLYIEFKAT VDPAPVSSSQ QACIRRLNDQ GYLAVVCQGH
FDAMACLRAY LALPKTEVAA