Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1554 |
Symbol | |
ID | 1045450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1752590 |
End bp | 1753012 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144954 |
Product | hypothetical protein |
Protein accession | NP_743711 |
Protein GI | 26988286 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.272176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000324297 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCAATC AGCGCCCCCC GTTTCGTAAC CCGGCCCGCG CCAAGCCCGT CGACCGGGAA GGGCAGGAGC AGGCTGCCCT GCTCGAAGAG ATTCAGCTGC GCTATCCGGA TGTGTACGAG CTGATCTGCC ACGTCCCGAA TGGCGGCCAT CGGCACAAGG GCGTGGCGCT CAAGCTCAAA GCCCAGGGCG TAAAGGCCGG CATCCCCGAT CTGGTCCTGA CCATGGCTCG CGGCGGTTAC TTCGGCTTGT ACATCGAATT CAAGGCGACC GTAGACCCGG CGCCTGTTTC GTCCAGCCAG CAAGCGTGCA TTCGCCGGCT GAACGACCAA GGCTACCTGG CCGTTGTGTG TCAGGGGCAT TTCGACGCCA TGGCGTGCCT GAGGGCGTAC CTGGCCCTGC CAAAAACGGA GGTTGCAGCA TGA
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Protein sequence | MTNQRPPFRN PARAKPVDRE GQEQAALLEE IQLRYPDVYE LICHVPNGGH RHKGVALKLK AQGVKAGIPD LVLTMARGGY FGLYIEFKAT VDPAPVSSSQ QACIRRLNDQ GYLAVVCQGH FDAMACLRAY LALPKTEVAA
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