Gene PP_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1551 
Symbol 
ID1045454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1750638 
End bp1751492 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content60% 
IMG OID637144951 
Productphage replication protein O, putative 
Protein accessionNP_743708 
Protein GI26988283 
COG category 
COG ID 
TIGRFAM ID[TIGR01610] phage replication protein O, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.36071e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAAACA TCGTCCCACT TGACAAGTCC AGGGGGTTCA CCCGGATGGA CAACCAGCTC 
ATGGATGGCC TGCTGGCTAT CGATCTCCCG GCCCGGGAGA TGAAGATTGT GCTGTACGTG
GCCAAGGCCA CCATCAACTT CGGTGCGGGC GCTCAACGCA TCCCGGCTAC CGACATCGCG
AAAGCCATCC ACGCTCACCC TGACACCGTG TCCAAGGCGG TTTCCAGCCT GCTGCGTCGC
CGTGTCCTGT TCCGCGAAGG TGGTGCCCGG GGTGACATCG GCGTGAATGA CCCGAAGGAC
TGGATTTACG TTGATCCGAA ACAGACCAAA ACAGCCGACT CGGCTGAAGT GGTCCGAATC
GGCTCAGAGT CGAAACAGAC CAAAACCGCC GACTCCCTTC TTTATTCTAA GAAAGAAACC
CCCTATGTAA ATCTTCCTTC GGAAGATGTT ACATGCCCCC CCAGCGAGCC GGAGCCGACT
CCGGCCAAGG ATGAGCGCAA GGCTCCCTTC GGCAAAGCCG CCATGCTGGC CGACAATCCG
CACGGGCTCG ATGAATCCCT GATCGCTGAT TACTTGGCTG TCCGCAAGTC CAAGGGCGCC
CCAATGAGCT CCCGGGTTTG GACGCGCTTG AACGACAAGC TTCGCCAGTG CCTGACCTTC
GGTATCCAGC CTGCCCAGGT CATGGAAATC GTCATCGAGA GCGGGTGGCG CAGCTTCGAG
GTGGAATGGA TCACCAAGCG ATTCGCCGCC AAATCGCCCG CACAGGGCAA GCCGAACAGC
CGTCATCACG GCTTCAACGA CCGCGACTAC ACCGCCGGCC TGTCCGAGCG TGAGGACGGC
ACCTATGCGA TCTGA
 
Protein sequence
MTNIVPLDKS RGFTRMDNQL MDGLLAIDLP AREMKIVLYV AKATINFGAG AQRIPATDIA 
KAIHAHPDTV SKAVSSLLRR RVLFREGGAR GDIGVNDPKD WIYVDPKQTK TADSAEVVRI
GSESKQTKTA DSLLYSKKET PYVNLPSEDV TCPPSEPEPT PAKDERKAPF GKAAMLADNP
HGLDESLIAD YLAVRKSKGA PMSSRVWTRL NDKLRQCLTF GIQPAQVMEI VIESGWRSFE
VEWITKRFAA KSPAQGKPNS RHHGFNDRDY TAGLSEREDG TYAI