Gene PP_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1475 
Symbol 
ID1045750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1679597 
End bp1680796 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content65% 
IMG OID637144876 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionNP_743633 
Protein GI26988208 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.238925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGC CCAGCAAACC CCTCGCCGGC CTTAAAGTTG TCGAACTCGG TACCCTGATC 
GCCGGGCCGT TCGCCTCGCG TATCTGTGCC GAATTCGGCG CCGAAGTGGT CAAGGTCGAA
TCGCCCGATG GCGGCGACCC GCTGCGCAAG TGGCGCAAGC TGTACGAGGG CACCTCGCTG
TGGTGGTTCG TGCAGGCCCG CAACAAGCAG TCGCTCACCC TCAACCTCAA GCACCCCGAG
GGCCGCGATA TCCTCAAGCG CCTGCTGGCC GAGGCCGACA TCCTGATCGA AAACTTTCGC
CCGGGCGTGC TGGAAAAACT TGGTTTGGGG TGGGATGTGC TGCATGCGCT GAACCCGCGC
CTGGTGATGG TGCGCCTGTC GGGCTTTGGC CAGACCGGGC CGATGAAAGA CCAGCCAGGC
TTCGGTGCCG TAGGCGAGTC GATGGGCGGC CTGCGCTACA TCACCGGTTT CGATGACCGC
CCGCCAGTGC GCACGGGGAT TTCCATCGGT GACTCGATTG CCGCCCTGTG GGGGGTGATC
GGCGCGCTGA TGGCGCTGCG CCACCGGGAA GTCAATGGCG GCCAGGGCCA GGTGGTGGAC
GTGGCCCTGT ACGAGGCGAT CTTTGCCATG ATGGAGAGCA TGGTGCCGGA ATTCGATGTG
TTCGGTTTCA TCCGCGAACG CACCGGCAAC ATCATGCCGG GCATCACGCC CTCCTCCATC
CACACAAGCG CCGACGGCAA GCATGTGCAG ATCGGCGCCA ACGGTGATGC CATCTTCAAG
CGCTTCATGC AGGCCATCGG TCGCGATGAC CTCGCCAACG ACCCGACCCT GGCCAGCAAC
GACGGCCGCG ACCTGCGTCG TGACGAGCTG TATGGGGTGA TCGACCGCTG GGCCAACAGC
CTGCCACTGG AGCAACTGAT GCAGGTGCTG ACCACTGCCG AAGTGCCGGC CAGCCGTATC
TATTCGGCCG AGGACATGTT CAACGACCCC CAGTACCTGG CACGCGAGAT GTTCCTGCAG
GCCAAGCTGC CGGATGGCAA GCCATTCCAC ATGCCCGGCA TCGTGCCCAA GCTGTCGGAG
ACTCCCGGCT CTAGCGAATG GGTCGGCCCG GCCTTGGGCG AGCATACCGA GGCGCTGCTC
GGCAGCCTGG GCTACGACGC AGCGGCCATC GCCAGCCTGC GCGCAGCGGG CACGGTCTGA
 
Protein sequence
MSTPSKPLAG LKVVELGTLI AGPFASRICA EFGAEVVKVE SPDGGDPLRK WRKLYEGTSL 
WWFVQARNKQ SLTLNLKHPE GRDILKRLLA EADILIENFR PGVLEKLGLG WDVLHALNPR
LVMVRLSGFG QTGPMKDQPG FGAVGESMGG LRYITGFDDR PPVRTGISIG DSIAALWGVI
GALMALRHRE VNGGQGQVVD VALYEAIFAM MESMVPEFDV FGFIRERTGN IMPGITPSSI
HTSADGKHVQ IGANGDAIFK RFMQAIGRDD LANDPTLASN DGRDLRRDEL YGVIDRWANS
LPLEQLMQVL TTAEVPASRI YSAEDMFNDP QYLAREMFLQ AKLPDGKPFH MPGIVPKLSE
TPGSSEWVGP ALGEHTEALL GSLGYDAAAI ASLRAAGTV