Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1475 |
Symbol | |
ID | 1045750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1679597 |
End bp | 1680796 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144876 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | NP_743633 |
Protein GI | 26988208 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.238925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACGC CCAGCAAACC CCTCGCCGGC CTTAAAGTTG TCGAACTCGG TACCCTGATC GCCGGGCCGT TCGCCTCGCG TATCTGTGCC GAATTCGGCG CCGAAGTGGT CAAGGTCGAA TCGCCCGATG GCGGCGACCC GCTGCGCAAG TGGCGCAAGC TGTACGAGGG CACCTCGCTG TGGTGGTTCG TGCAGGCCCG CAACAAGCAG TCGCTCACCC TCAACCTCAA GCACCCCGAG GGCCGCGATA TCCTCAAGCG CCTGCTGGCC GAGGCCGACA TCCTGATCGA AAACTTTCGC CCGGGCGTGC TGGAAAAACT TGGTTTGGGG TGGGATGTGC TGCATGCGCT GAACCCGCGC CTGGTGATGG TGCGCCTGTC GGGCTTTGGC CAGACCGGGC CGATGAAAGA CCAGCCAGGC TTCGGTGCCG TAGGCGAGTC GATGGGCGGC CTGCGCTACA TCACCGGTTT CGATGACCGC CCGCCAGTGC GCACGGGGAT TTCCATCGGT GACTCGATTG CCGCCCTGTG GGGGGTGATC GGCGCGCTGA TGGCGCTGCG CCACCGGGAA GTCAATGGCG GCCAGGGCCA GGTGGTGGAC GTGGCCCTGT ACGAGGCGAT CTTTGCCATG ATGGAGAGCA TGGTGCCGGA ATTCGATGTG TTCGGTTTCA TCCGCGAACG CACCGGCAAC ATCATGCCGG GCATCACGCC CTCCTCCATC CACACAAGCG CCGACGGCAA GCATGTGCAG ATCGGCGCCA ACGGTGATGC CATCTTCAAG CGCTTCATGC AGGCCATCGG TCGCGATGAC CTCGCCAACG ACCCGACCCT GGCCAGCAAC GACGGCCGCG ACCTGCGTCG TGACGAGCTG TATGGGGTGA TCGACCGCTG GGCCAACAGC CTGCCACTGG AGCAACTGAT GCAGGTGCTG ACCACTGCCG AAGTGCCGGC CAGCCGTATC TATTCGGCCG AGGACATGTT CAACGACCCC CAGTACCTGG CACGCGAGAT GTTCCTGCAG GCCAAGCTGC CGGATGGCAA GCCATTCCAC ATGCCCGGCA TCGTGCCCAA GCTGTCGGAG ACTCCCGGCT CTAGCGAATG GGTCGGCCCG GCCTTGGGCG AGCATACCGA GGCGCTGCTC GGCAGCCTGG GCTACGACGC AGCGGCCATC GCCAGCCTGC GCGCAGCGGG CACGGTCTGA
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Protein sequence | MSTPSKPLAG LKVVELGTLI AGPFASRICA EFGAEVVKVE SPDGGDPLRK WRKLYEGTSL WWFVQARNKQ SLTLNLKHPE GRDILKRLLA EADILIENFR PGVLEKLGLG WDVLHALNPR LVMVRLSGFG QTGPMKDQPG FGAVGESMGG LRYITGFDDR PPVRTGISIG DSIAALWGVI GALMALRHRE VNGGQGQVVD VALYEAIFAM MESMVPEFDV FGFIRERTGN IMPGITPSSI HTSADGKHVQ IGANGDAIFK RFMQAIGRDD LANDPTLASN DGRDLRRDEL YGVIDRWANS LPLEQLMQVL TTAEVPASRI YSAEDMFNDP QYLAREMFLQ AKLPDGKPFH MPGIVPKLSE TPGSSEWVGP ALGEHTEALL GSLGYDAAAI ASLRAAGTV
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