| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1450 |
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| Symbol | |
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| ID | 1045807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1656792 |
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| End bp | 1658489 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637144851 |
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| Product | TPS family activation/secretion protein |
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| Protein accession | NP_743608 |
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| Protein GI | 26988183 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.548227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.440482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGGGTG CTTCAATGCC GTGCCTGATT CACCGCATCG CCCATTGGCT GTCGGCCGGT
TGCCTTTCTG GCTTGCTGTC CATTCCCCAG GTGCTGGCCG ACGACCCTGC CAGCCAGCAG
TTGCGCGATC AACAGCATGG GCTGCGGCAA CTGGAGCAAC AGCAGCGGCT GGAACGCTGG
CAGCGTATAC CCGTCCCGGC TGAACCGACC AACAGCACTT CCCACCGCCC GCACGATGAT
CGCTGCTGGG CAGTCGATGG CGTGCGCGTG GCGGGCATGC ACCGGCTTTC GAACTCGGCA
CTGGCGCCCA CCATCCGTGC CCTCACGCCT GCCTGCATGG GCATCGCCGA CATCAACCGG
CTGCTCAAAG CCATCACCCA ACGTTATGTA CAAGCCGGCT ACCCAACCAG CCGCCCCTAC
CTGCGCCAGC CCCCAGCAGA GGGCATGCCG TTGGACATCG TCATTGTCGA AGGCTTTGTC
GAAACCATCG AACTGGCTGG CCCCGACCTA CCCCTGTCTC TCTCCAGTGC CTTCCCAGGC
CTGCTTGGGC AGCCACTGTA CCTGCCCGAC CTTGAGCAAG GCCTGGACCA GCTCAACCGC
CTTCGCGCCT ATGAACTGGG CGCCACCTTG CTGCCCGGCG AACTGCAGGG CGGCACCCGC
GTGGTCGTGC AGCCGGGCAA GGTTGCTTCA CGCTGGCACC TGGACAGCCG CTTCGACAAC
CGGGGCAGCG AGCTGACCGG CCGCCACCGC GTCAACCTCG GCATTGGCCT GGACAGCCCG
CTTGGCCTCA ATGATGAGCT GCGCCTGTCG TTGGCCCGCA CGGTGCTCGA TACGCCCGGC
CAAAGCCAAG GGATATCGTT GTACTACAGC ATCCCCTACG GCGCCTGGAC CTTTGCCCTC
AGCGCCAGCC AGCTAAGCTA TCAAGCCCCC CTCCCCTACA GCGACAAGGC TGCCGACGGC
AGCAGCAGCT ATCAGGGCCT GAGTGTCGAG CGGGTATTGT GGCGCAACCA GCAAGGCATG
CTCAGCGCCA GCGCCCGTCT GGACCGCAAG CAGCTGATCA ACCGCAGCGC TGGCGCGGTT
ATCGTCCAGC AGAGCCCGAC GCTGGCCACG GTAGAGGCCG GCATCAACCT GCTGTGGCTC
GAAAGTGGCC TGTGGAACGG TTACTTCGGC GTTGCCCAAG GCATTGACGC ATTGGGTGCC
GACCGCTCGC CCCTGGGTGC TCATCGCCTG CGCCCGGACT TTCGCAAGTA CCGCGCCAAC
CTGCTGCACC TGCGTCAAGG CCCGGCACCC AGCCCTTGGC GCTGGCAGAG CGAGCTGGCC
ATGCAGTACA GCCGTGACCC GCTGCCTGCC GTCGAACAGC TGCTGGTCAG CGACGATTCG
GCTGTCCGCG GCTTTCGTCT GCACACTTAC TCCGGTGCCA GCAGCGCCGT CTGGCGCAAT
ACGTTCAGCC AGGCGCTGCC ACGGACCTGG GCCCCACCTT TCGAGATACG CCCCTACATC
GGCCTGGACC TGGGCTGGGT TCGCACCGCC GAAGGCAAAC CGTCACAGCG CCTGGCCGGG
GCCGCCGCAG GGTTGGAACT GAGCCTGCCC GGCAGCCGCC TGCGCCTGGA CTACCAACGC
GCCTTGTACA CCAGCGACCT GCCCCGCCCG CGGCTGGAGC CCGGCTTCTG GGTGCTGGAC
TGGACCCTGA GCATCTGA
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| Protein sequence | MRGASMPCLI HRIAHWLSAG CLSGLLSIPQ VLADDPASQQ LRDQQHGLRQ LEQQQRLERW
QRIPVPAEPT NSTSHRPHDD RCWAVDGVRV AGMHRLSNSA LAPTIRALTP ACMGIADINR
LLKAITQRYV QAGYPTSRPY LRQPPAEGMP LDIVIVEGFV ETIELAGPDL PLSLSSAFPG
LLGQPLYLPD LEQGLDQLNR LRAYELGATL LPGELQGGTR VVVQPGKVAS RWHLDSRFDN
RGSELTGRHR VNLGIGLDSP LGLNDELRLS LARTVLDTPG QSQGISLYYS IPYGAWTFAL
SASQLSYQAP LPYSDKAADG SSSYQGLSVE RVLWRNQQGM LSASARLDRK QLINRSAGAV
IVQQSPTLAT VEAGINLLWL ESGLWNGYFG VAQGIDALGA DRSPLGAHRL RPDFRKYRAN
LLHLRQGPAP SPWRWQSELA MQYSRDPLPA VEQLLVSDDS AVRGFRLHTY SGASSAVWRN
TFSQALPRTW APPFEIRPYI GLDLGWVRTA EGKPSQRLAG AAAGLELSLP GSRLRLDYQR
ALYTSDLPRP RLEPGFWVLD WTLSI
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