| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1386 |
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| Symbol | ttgA |
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| ID | 1041938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1581396 |
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| End bp | 1582550 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144787 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | NP_743545 |
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| Protein GI | 26988120 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.178254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA AGCCAGCCGT TACCGCTCTG GTTTCCGCCG TCGCCCTGGC AACCCTGCTC
AGTGGCTGTA AGAAAGAAGA AGCAGCGCCA GCGGCGCAGG CTCCTCAGGT CGGCGTCGTG
ACCATCCAGC CGCAAGCCTT CACCCTCACC TCGGAATTGC CGGGGCGAAC CAGTGCCTAC
CGCGTCGCCG AAGTGCGCCC GCAGGTCAAC GGCATCATCC TCAAGCGCCT GTTCAAGGAA
GGCAGTGAGG TCAAGGAAGG CCAGCAGTTG TATCAGATCG ACCCTGCCGT GTACGAAGCC
ACCCTGGCCA ATGCCAAGGC CAACCTGCTG GCTACACGCT CACTGGCCGA ACGTTACAAG
CAACTGATTG ACGAACAGGC CGTCTCCAAA CAGGAATACG ACGACGCCAA TGCCAAACGA
TTGCAGGCTG AGGCTTCGCT CAAGAGCGCA CAGATCGACC TGCGCTACAC CAAGGTTCTG
GCGCCAATCA GCGGCCGTAT CGGTCGCTCT TCGTTCACCG AGGGTGCACT GGTGAGCAAT
GGCCAGACCG ACGCCATGGC CACCATCCAG CAGCTCGATC CTATTTATGT CGACGTTACC
CAGTCCACCG CCGAGCTGCT CAAGCTGCGC CGTGACCTGG AAAGCGGCCA GTTGCAGAAG
GCCGGCGACA ACGCCGCCTC GGTTCAGCTG GTACTGGAAG ACGGCAGCCT GTTCAAGCAG
GAAGGTCGCC TGGAATTCTC CGAAGTCGCG GTGGACGAGA CCACCGGCTC GGTGACCCTG
CGCGCCCTGT TCCCCAACCC CGATCACACC CTGCTGCCAG GCATGTTCGT GCATGCGCGG
CTCAAGGCCG GGGTCAACGC CAACGCCATC CTGGCACCGC AACAAGGCGT GACCCGCGAC
CTCAAGGGCG CACCCACCGC CCTGGTGGTC AACCAGGAGA ACAAGGTCGA ACTGCGCCAG
CTCAAGGCCA GCCGCACCTT GGGTAGCGAC TGGCTGATCG AGGAAGGCCT CAACCCGGGT
GACCGCCTGA TCACCGAAGG GCTGCAGTAC GTGCGCCCAG GCGTCGAGGT GAAGGTCAGC
GATGCCACCA ACGTCAAGAA GCCGGCCGGT CCTGATCAGG CCAACGCGGC GAAAGCAGAC
GCCAAAGCGG AGTAA
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| Protein sequence | MQFKPAVTAL VSAVALATLL SGCKKEEAAP AAQAPQVGVV TIQPQAFTLT SELPGRTSAY
RVAEVRPQVN GIILKRLFKE GSEVKEGQQL YQIDPAVYEA TLANAKANLL ATRSLAERYK
QLIDEQAVSK QEYDDANAKR LQAEASLKSA QIDLRYTKVL APISGRIGRS SFTEGALVSN
GQTDAMATIQ QLDPIYVDVT QSTAELLKLR RDLESGQLQK AGDNAASVQL VLEDGSLFKQ
EGRLEFSEVA VDETTGSVTL RALFPNPDHT LLPGMFVHAR LKAGVNANAI LAPQQGVTRD
LKGAPTALVV NQENKVELRQ LKASRTLGSD WLIEEGLNPG DRLITEGLQY VRPGVEVKVS
DATNVKKPAG PDQANAAKAD AKAE
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